RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, human

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-219	ENST00000480638	GRK7	Q8WTQ7	553 aa		4.23	□□□□□ -1.73
CALD1-219	ENST00000480638	CHPT1	Q8WUD6	406 aa		4.23	□□□□□ -1.73
CALD1-219	ENST00000480638	CASP10	Q92851	521 aa		4.23	□□□□□ -1.73
CALD1-219	ENST00000480638	ST6GALNAC6	Q969X2	333 aa		4.23	□□□□□ -1.73
CALD1-219	ENST00000480638	NXPE2	Q96DL1	559 aa		4.23	□□□□□ -1.73
CALD1-219	ENST00000480638	AK8	Q96MA6	479 aa		4.23	□□□□□ -1.73
CALD1-219	ENST00000480638	SOST	Q9BQB4	213 aa		4.23	□□□□□ -1.73
CALD1-219	ENST00000480638	FERMT1	Q9BQL6	677 aa		4.23	□□□□□ -1.73
CALD1-219	ENST00000480638	INPP5K	Q9BT40	448 aa		4.23	□□□□□ -1.73
CALD1-219	ENST00000480638	DCTN5	Q9BTE1	182 aa		4.23	□□□□□ -1.73
CALD1-219	ENST00000480638	TRIM6	Q9C030	488 aa	Predicted RBP	4.23	□□□□□ -1.73
CALD1-219	ENST00000480638	THAP10	Q9P2Z0	257 aa	Predicted RBP	4.23	□□□□□ -1.73
CALD1-219	ENST00000480638	SLC12A6	Q9UHW9	1150 aa		4.23	□□□□□ -1.73
CALD1-219	ENST00000480638	AGTPBP1	Q9UPW5	1226 aa		4.23	□□□□□ -1.73
CALD1-219	ENST00000480638	IGHV4-30-2	A0A087WSY4	118 aa		4.22	□□□□□ -1.73
CALD1-219	ENST00000480638	HTR3E	A5X5Y0	456 aa		4.22	□□□□□ -1.73
CALD1-219	ENST00000480638	FLRT2	O43155	660 aa		4.22	□□□□□ -1.73
CALD1-219	ENST00000480638	C9	P02748	559 aa		4.22	□□□□□ -1.73
CALD1-219	ENST00000480638	CAPN2	P17655	700 aa		4.22	□□□□□ -1.73
CALD1-219	ENST00000480638	LBP	P18428	481 aa		4.22	□□□□□ -1.73
CALD1-219	ENST00000480638	EDNRA	P25101	427 aa		4.22	□□□□□ -1.73
CALD1-219	ENST00000480638	PSMB4	P28070	264 aa		4.22	□□□□□ -1.73
CALD1-219	ENST00000480638	SSTR1	P30872	391 aa		4.22	□□□□□ -1.73
CALD1-219	ENST00000480638	CAPZA1	P52907	286 aa		4.22	□□□□□ -1.73
CALD1-219	ENST00000480638	C3P1	Q6ZMU1	363 aa		4.22	□□□□□ -1.73
CALD1-219	ENST00000480638	FAM131B	Q86XD5	332 aa		4.22	□□□□□ -1.73
CALD1-219	ENST00000480638	LMNTD2	Q8IXW0	634 aa		4.22	□□□□□ -1.73
CALD1-219	ENST00000480638	C17orf47	Q8NEP4	570 aa		4.22	□□□□□ -1.73
CALD1-219	ENST00000480638	EXOC1	Q9NV70	894 aa		4.22	□□□□□ -1.73
CALD1-219	ENST00000480638	NLGN3	Q9NZ94	848 aa		4.22	□□□□□ -1.73
CALD1-219	ENST00000480638	POLK	Q9UBT6	870 aa		4.22	□□□□□ -1.73
CALD1-219	ENST00000480638	POMT2	Q9UKY4	750 aa		4.22	□□□□□ -1.73
CALD1-219	ENST00000480638	KLK4	Q9Y5K2	254 aa		4.22	□□□□□ -1.73
CALD1-219	ENST00000480638	TRAV18	A0A075B6X5	111 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	IGHV3-20	A0A0C4DH32	117 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638		A0A1B0GVY2	172 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	ARHGEF37	A1IGU5	675 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	SHISA7	A6NL88	538 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638		E5RGE8	158 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	MAGEB2	O15479	319 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	SNAP91	O60641	907 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	EIF5B	O60841	1220 aa	Known RBP	4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	IGHV3-13	P01766	116 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	FAM58BP	P0C7Q3	252 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	SELE	P16581	610 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	C4BPB	P20851	252 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	PRKCI	P41743	596 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	CDO1	Q16878	200 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	DHRS11	Q6UWP2	260 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	SPATA21	Q7Z572	469 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	C5orf24	Q7Z6I8	188 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	P2RY8	Q86VZ1	359 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	CROCCP3	Q8IVE0	287 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	THNSL1	Q8IYQ7	743 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	AMER3	Q8N944	861 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	RPLP0P6	Q8NHW5	317 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	NCOA7	Q8NI08	942 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	SETD6	Q8TBK2	473 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	RASL10A	Q92737	203 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	LURAP1	Q96LR2	239 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	INTS14	Q96SY0	518 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	RPS10P5	Q9NQ39	176 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	CTSZ	Q9UBR2	303 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	BAIAP2L1	Q9UHR4	511 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	NRBP1	Q9UHY1	535 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	RUVBL2	Q9Y230	463 aa	Known RBP	4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	ZNF510	Q9Y2H8	683 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	NSG2	Q9Y328	171 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	NEDD4	P46934	1319 aa		4.21	□□□□□ -1.74
CALD1-219	ENST00000480638	TP53BP1	Q12888	1972 aa	Predicted RBP	4.2	□□□□□ -1.74
CALD1-219	ENST00000480638	IGHV3-38	A0A0C4DH36	116 aa		4.2	□□□□□ -1.74
CALD1-219	ENST00000480638	hCG_38984	A0A1B0GV85	526 aa		4.2	□□□□□ -1.74
CALD1-219	ENST00000480638	NKX6-3	A6NJ46	265 aa		4.2	□□□□□ -1.74
CALD1-219	ENST00000480638		A8MXK9	166 aa		4.2	□□□□□ -1.74
CALD1-219	ENST00000480638	KIF5C	O60282	957 aa		4.2	□□□□□ -1.74
CALD1-219	ENST00000480638	HPR	P00739	348 aa		4.2	□□□□□ -1.74
CALD1-219	ENST00000480638	RPLP0	P05388	317 aa	Known RBP	4.2	□□□□□ -1.74
CALD1-219	ENST00000480638	VIM	P08670	466 aa	Known RBP	4.2	□□□□□ -1.74
CALD1-219	ENST00000480638	AOC1	P19801	751 aa		4.2	□□□□□ -1.74
CALD1-219	ENST00000480638	OXTR	P30559	389 aa		4.2	□□□□□ -1.74
CALD1-219	ENST00000480638	TFCP2	Q12800	502 aa		4.2	□□□□□ -1.74
CALD1-219	ENST00000480638	ZNF239	Q16600	458 aa	Known RBP	4.2	□□□□□ -1.74
CALD1-219	ENST00000480638	MS4A18	Q3C1V0	323 aa		4.2	□□□□□ -1.74
CALD1-219	ENST00000480638	SPOUT1	Q5T280	376 aa	Known RBP	4.2	□□□□□ -1.74
CALD1-219	ENST00000480638	FAM46C	Q5VWP2	391 aa		4.2	□□□□□ -1.74
CALD1-219	ENST00000480638	SPINK14	Q6IE38	97 aa		4.2	□□□□□ -1.74
CALD1-219	ENST00000480638	SPATA19	Q7Z5L4	167 aa		4.2	□□□□□ -1.74
CALD1-219	ENST00000480638	SLC47A2	Q86VL8	602 aa		4.2	□□□□□ -1.74
CALD1-219	ENST00000480638	IL12RB2	Q99665	862 aa		4.2	□□□□□ -1.74
CALD1-219	ENST00000480638	RAB11FIP5	Q9BXF6	653 aa		4.2	□□□□□ -1.74
CALD1-219	ENST00000480638	EDEM3	Q9BZQ6	932 aa		4.2	□□□□□ -1.74
CALD1-219	ENST00000480638	GPN1	Q9HCN4	374 aa	Predicted RBP	4.2	□□□□□ -1.74
CALD1-219	ENST00000480638	RAB9B	Q9NP90	201 aa		4.2	□□□□□ -1.74
CALD1-219	ENST00000480638	C5orf52	A6NGY3	159 aa		4.19	□□□□□ -1.74
CALD1-219	ENST00000480638	NPIPA3	F8WFD2	350 aa		4.19	□□□□□ -1.74
CALD1-219	ENST00000480638	SIX3	O95343	332 aa	Predicted RBP	4.19	□□□□□ -1.74
CALD1-219	ENST00000480638	MOCS2	O96007	188 aa	Predicted RBP	4.19	□□□□□ -1.74
CALD1-219	ENST00000480638	ZFY	P08048	801 aa	Predicted RBP	4.19	□□□□□ -1.74
CALD1-219	ENST00000480638	EEF2	P13639	858 aa	Known RBP	4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms