RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 NIPSNAP1Q9BPW8 284 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 TSEN34Q9BSV6 310 aaKnown RBP12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 FKBP14Q9NWM8 211 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 MUTYHQ9UIF7 546 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 CRLS1Q9UJA2 301 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 WBP11Q9Y2W2 641 aaKnown RBP12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 BACE2Q9Y5Z0 518 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 GLYATL1P3A0A0U1RQE8 302 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 SCO2O43819 266 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 STK16O75716 305 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 WDR47O94967 919 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 CLDN9O95484 217 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 PIK3CBP42338 1070 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 RFX2P48378 723 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 TGM4P49221 684 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 KCNJ10P78508 379 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 MRPS15P82914 257 aaKnown RBP12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 LMAN2Q12907 356 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 SNAP47Q5SQN1 464 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 ZNF648Q5T619 568 aaPredicted RBP12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 VRK3Q8IV63 474 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 HS6ST3Q8IZP7 471 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 RBFAQ8N0V3 343 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 ASCC1Q8N9N2 400 aaKnown RBP12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 OVCA2Q8WZ82 227 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 MYDGFQ969H8 173 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 CEP295NLQ96MC4 621 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 IL21Q9HBE4 155 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 HMX1Q9NP08 348 aaPredicted RBP12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 CD84Q9UIB8 345 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 STOML2Q9UJZ1 356 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 RPS6KA6Q9UK32 745 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 PCDHB1Q9Y5F3 818 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 PEX16Q9Y5Y5 336 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 LYVE1Q9Y5Y7 322 aa12.83□□□□□ -0.36
PDZRN3-208ENST00000479530 A0A1W2PQ67 120 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 NOTOA8MTQ0 251 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 PRAMEF4O60810 478 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 SCN2BO60939 215 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 APOA1P02647 267 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 OPN1SWP03999 348 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 ACPPP15309 386 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 AZGP1P25311 298 aaKnown RBP12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 CCR7P32248 378 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 KIR3DL1P43629 444 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 DGKEP52429 567 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 WNT3P56703 355 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 DEFA1P59665 94 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 DEFA3P59666 94 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 GPR50Q13585 617 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 UGT8Q16880 541 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 ATP13A5Q4VNC0 1218 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 PRAMEF9Q5VWM5 478 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 CRTC1Q6UUV9 634 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 STX19Q8N4C7 294 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 CDC26Q8NHZ8 85 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 UTP15Q8TED0 518 aaKnown RBP12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 MRPL9Q9BYD2 267 aaKnown RBP12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 RAPGEFL1Q9UHV5 662 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 MKLN1Q9UL63 735 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 BTBD3Q9Y2F9 522 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 TFECO14948 347 aaPredicted RBP12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 POU2F1P14859 743 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 PRKCAP17252 672 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 TNFSF8P32971 234 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 SLAMF1Q13291 335 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 ZFP69Q49AA0 526 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 CYP27C1Q4G0S4 372 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 Q5BKY6 102 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 C10orf62Q5T681 223 aaPredicted RBP12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 ZNF544Q6NX49 715 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 CERS6Q6ZMG9 384 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 Q6ZNB5 142 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 GAREM2Q75VX8 874 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 DNAJB8Q8NHS0 232 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 TESCQ96BS2 214 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 TMEM246Q9BRR3 403 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 CCM2Q9BSQ5 444 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 CCDC177Q9NQR7 707 aaPredicted RBP12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 PAQR5Q9NXK6 330 aaPredicted RBP12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 TAS2R9Q9NYW1 312 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 FAM8A1Q9UBU6 413 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 TMPRSS11EQ9UL52 423 aa12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 CFAP20Q9Y6A4 193 aaKnown RBP12.82□□□□□ -0.36
PDZRN3-208ENST00000479530 H3BM21 787 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 ARHGAP33O14559 1287 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 KRT6AP02538 564 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 KRT6BP04259 564 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 GPX2P18283 190 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 GABRB1P18505 474 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 ITGALP20701 1170 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 LHCGRP22888 699 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 DGKAP23743 735 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 OR1E2P47887 323 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 KRT6CP48668 564 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 RGS4P49798 205 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 MED22Q15528 200 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 BAK1Q16611 211 aa12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 TSTQ16762 297 aaKnown RBP12.81□□□□□ -0.36
PDZRN3-208ENST00000479530 DUOXA1Q1HG43 343 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms