RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 SWSAP1Q6NVH7 229 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 BTNL3Q6UXE8 466 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 GPRIN3Q6ZVF9 776 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 ADGRG3Q86Y34 549 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 TMEM130Q8N3G9 435 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 OR13C8Q8NGS7 320 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 ITPKCQ96DU7 683 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 KCTD7Q96MP8 289 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 COL25A1Q9BXS0 654 aaPredicted RBP5.29□□□□□ -1.56
USF3-202ENST00000478658 TEX10Q9NXF1 929 aaPredicted RBP5.29□□□□□ -1.56
USF3-202ENST00000478658 PRODH2Q9UF12 536 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 NACAE9PAV3 2078 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 A0A1W2PP64 1363 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 E7EQ34 232 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 RHOP08100 348 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 MAPTP10636 758 aaKnown RBP5.29□□□□□ -1.56
USF3-202ENST00000478658 RYKP34925 604 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 CLCN4P51793 760 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 SMSP52788 366 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 SNRNP35Q16560 246 aaKnown RBP5.29□□□□□ -1.56
USF3-202ENST00000478658 TXNRD1Q16881 649 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 CTSL3PQ5NE16 218 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 ADAM5Q6NVV9 412 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 TXNRD3Q86VQ6 643 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 ZNF100Q8IYN0 542 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 UBQLNLQ8IYU4 475 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 FAM83FQ8NEG4 500 aaPredicted RBP5.29□□□□□ -1.56
USF3-202ENST00000478658 SH3RF3Q8TEJ3 882 aaPredicted RBP5.29□□□□□ -1.56
USF3-202ENST00000478658 TAAR9Q96RI9 348 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 SLC35A5Q9BS91 424 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 TIMM29Q9BSF4 260 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 TUBG2Q9NRH3 451 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 PIGVQ9NUD9 493 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 PCDHGA1Q9Y5H4 931 aa5.29□□□□□ -1.56
USF3-202ENST00000478658 ATP10BO94823 1461 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 ABCC10Q5T3U5 1492 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 COL17A1Q9UMD9 1497 aaPredicted RBP5.28□□□□□ -1.56
USF3-202ENST00000478658 PBRM1Q86U86 1689 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 ASTN1O14525 1302 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 FAM24AA6NFZ4 105 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 BEST1O76090 585 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 ZBTB11O95625 1053 aaPredicted RBP5.28□□□□□ -1.56
USF3-202ENST00000478658 IL5P05113 134 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 ANXA4P09525 319 aaPredicted RBP5.28□□□□□ -1.56
USF3-202ENST00000478658 SERPINA2P20848 420 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 NPBWR1P48145 328 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 DGKGP49619 791 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 MEF2AQ02078 507 aaPredicted RBP5.28□□□□□ -1.56
USF3-202ENST00000478658 RPL6Q02878 288 aaKnown RBP5.28□□□□□ -1.56
USF3-202ENST00000478658 NAE1Q13564 534 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 GRAPQ13588 217 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 SF1Q15637 639 aaKnown RBP5.28□□□□□ -1.56
USF3-202ENST00000478658 NEDD8Q15843 81 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 ATAT1Q5SQI0 421 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 SHFQ7M4L6 423 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 PIWIL4Q7Z3Z4 852 aaKnown RBP5.28□□□□□ -1.56
USF3-202ENST00000478658 METTL25Q8N6Q8 603 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 BOLLQ8N9W6 283 aaKnown RBP5.28□□□□□ -1.56
USF3-202ENST00000478658 OR8S1Q8NH09 359 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 GRAPLQ8TC17 118 aaPredicted RBP5.28□□□□□ -1.56
USF3-202ENST00000478658 CLIP3Q96DZ5 547 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 SEC22CQ9BRL7 303 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 CCM2Q9BSQ5 444 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 NT5MQ9NPB1 228 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 CXXC1Q9P0U4 656 aaPredicted RBP5.28□□□□□ -1.56
USF3-202ENST00000478658 INTS6Q9UL03 887 aaKnown RBP5.28□□□□□ -1.56
USF3-202ENST00000478658 ACSL5Q9ULC5 683 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 TMA7Q9Y2S6 64 aaKnown RBP5.28□□□□□ -1.56
USF3-202ENST00000478658 MRPS23Q9Y3D9 190 aaKnown RBP5.28□□□□□ -1.56
USF3-202ENST00000478658 RNF215Q9Y6U7 377 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 SPAG17Q6Q759 2223 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 MAPKBP1O60336 1514 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 STMND1H3BQB6 276 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 SURF4O15260 269 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 PAPSS1O43252 624 aaPredicted RBP5.28□□□□□ -1.56
USF3-202ENST00000478658 HOXA3O43365 443 aaPredicted RBP5.28□□□□□ -1.56
USF3-202ENST00000478658 NPHS1O60500 1241 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 H6PDO95479 791 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 CALCAP01258 141 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 TNFP01375 233 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 UGT2B7P16662 529 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 EN2P19622 333 aaPredicted RBP5.28□□□□□ -1.56
USF3-202ENST00000478658 CHAF1BQ13112 559 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 TBCEQ15813 527 aaPredicted RBP5.28□□□□□ -1.56
USF3-202ENST00000478658 ZNF181Q2M3W8 571 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 BTBD16Q32M84 506 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 TMEM97Q5BJF2 176 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 C9orf64Q5T6V5 341 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 TMEM268Q5VZI3 342 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 CLVS1Q8IUQ0 354 aaPredicted RBP5.28□□□□□ -1.56
USF3-202ENST00000478658 SERPINA12Q8IW75 414 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 LMNTD1Q8N9Z9 388 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 PROKR2Q8NFJ6 384 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 NSMAFQ92636 917 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 GPKOWQ92917 476 aaPredicted RBP eCLIP5.28□□□□□ -1.56
USF3-202ENST00000478658 ATG4CQ96DT6 458 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 DNAJA3Q96EY1 480 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 CDKN2AIPNLQ96HQ2 116 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 PANX1Q96RD7 426 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 GFM1Q96RP9 751 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms