RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 TRBV5-3A0A0A0MS03 114 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 TRAV19A0A0A6YYK7 116 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 A0A0U1RQS6 177 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 OR14I1A6ND48 311 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 C16orf96A6NNT2 1141 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 LOC730098B7Z3J9 87 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 K7ERQ8 282 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 UPK1AO00322 258 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 CXCR6O00574 342 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 FFAR3O14843 346 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 WNT9AO14904 365 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 GRM6O15303 877 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 GPR42O15529 346 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 GPR39O43194 453 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 PQBP1O60828 265 aaKnown RBP4.78□□□□□ -1.64
SF3B6-202ENST00000478050 NOL3O60936 208 aaKnown RBP4.78□□□□□ -1.64
SF3B6-202ENST00000478050 SEC22BO75396 215 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 RECQL5O94762 991 aaPredicted RBP4.78□□□□□ -1.64
SF3B6-202ENST00000478050 SEC24DO94855 1032 aaPredicted RBP4.78□□□□□ -1.64
SF3B6-202ENST00000478050 SNAP29O95721 258 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 CPNE6O95741 557 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 ALPLP05186 524 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 CKMP06732 381 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 RETP07949 1114 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 GNAO1P09471 354 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 HIST1H2AGP0C0S8 130 aaPredicted RBP4.78□□□□□ -1.64
SF3B6-202ENST00000478050 SPATA31D3P0C874 917 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 NAT2P11245 290 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 CYP2A6P11509 494 aaPredicted RBP4.78□□□□□ -1.64
SF3B6-202ENST00000478050 CDK4P11802 303 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 BCKDHAP12694 445 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 SRCP12931 536 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 HIST1H2ADP20671 130 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 CYP2A7P20853 494 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 SDHBP21912 280 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 UGT1A1P22309 533 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 UGT1A4P22310 534 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 DCKP27707 260 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 GABRR2P28476 465 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 PCSK6P29122 969 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 S100A3P33764 101 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 CA5AP35218 305 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 UGT1A3P35503 534 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 UGT1A5P35504 534 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 MTHFRP42898 656 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 NRIP1P48552 1158 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 HNMTP50135 292 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 RPS6KA3P51812 740 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 CCL23P55773 120 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 AP1S2P56377 157 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 CLDN8P56748 225 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 GABARAPL2P60520 117 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 HPCAP84074 193 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 SRSF3P84103 164 aaKnown RBP4.78□□□□□ -1.64
SF3B6-202ENST00000478050 CHRNEQ04844 493 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 PLP2Q04941 152 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 ZNF33BQ06732 778 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 ABHD18Q0P651 414 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 GRSF1Q12849 480 aaKnown RBP eCLIP4.78□□□□□ -1.64
SF3B6-202ENST00000478050 BIRC2Q13490 618 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 TUBA3CQ13748 450 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 BOP1Q14137 746 aaKnown RBP4.78□□□□□ -1.64
SF3B6-202ENST00000478050 ARHGEF7Q14155 803 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 GBX1Q14549 363 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 PTGR1Q14914 329 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 PHKG1Q16816 387 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 DPY19L1Q2PZI1 675 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 RFX4Q33E94 735 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 FAM174BQ3ZCQ3 159 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 TM4SF20Q53R12 229 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 DGKKQ5KSL6 1271 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 SPANXN4Q5MJ08 99 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 PLEKHS1Q5SXH7 462 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 LRIF1Q5T3J3 769 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 BROXQ5VW32 411 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 TXNDC8Q6A555 127 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 C22orf39Q6P5X5 142 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 ZNF773Q6PK81 442 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 CRTC1Q6UUV9 634 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.78□□□□□ -1.64
SF3B6-202ENST00000478050 SPATA31D4Q6ZUB0 917 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 NEK10Q6ZWH5 1172 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 UBE2R2Q712K3 238 aaPredicted RBP4.78□□□□□ -1.64
SF3B6-202ENST00000478050 ANKRD33Q7Z3H0 272 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 DEFB128Q7Z7B8 93 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 GPR149Q86SP6 731 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 STK32CQ86UX6 486 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 GPR180Q86V85 440 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 CALHM3Q86XJ0 350 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 THNSL2Q86YJ6 484 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 CROCCP3Q8IVE0 287 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 ADHFE1Q8IWW8 467 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 EID3Q8N140 333 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 CLEC4FQ8N1N0 589 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 TMEM132CQ8N3T6 1108 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 CLDN19Q8N6F1 224 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 GPR26Q8NDV2 337 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 ZNF555Q8NEP9 628 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 PJA1Q8NG27 643 aa4.78□□□□□ -1.64
SF3B6-202ENST00000478050 OR6K2Q8NGY2 324 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms