RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 CMPK1P30085 196 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 TIMP3P35625 211 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 MAGEA5P43359 124 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 NR2C2P49116 596 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 PLGLB1Q02325 96 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 TNK1Q13470 666 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 TRIM14Q14142 442 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 NAA25Q14CX7 972 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 ACKR1Q16570 336 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 OCLNQ16625 522 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 NDUFA9Q16795 377 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 CHRFAM7AQ494W8 412 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 C10orf62Q5T681 223 aaPredicted RBP6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 NDUFAF5Q5TEU4 345 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 BLOC1S3Q6QNY0 202 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 APTXQ7Z2E3 356 aaKnown RBP6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 MAATS1Q7Z4T9 603 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 FAM109AQ8N4B1 249 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 TMEM156Q8N614 296 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 MAPK1IP1LQ8NDC0 245 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 PSD4Q8NDX1 1056 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 NFAM1Q8NET5 270 aaPredicted RBP6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 OR2M7Q8NG81 312 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 ASZ1Q8WWH4 475 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 IGFBPL1Q8WX77 278 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 RERGQ96A58 199 aaPredicted RBP6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 APOL2Q9BQE5 337 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 ACAT2Q9BWD1 397 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 PRR14Q9BWN1 585 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 MAK16Q9BXY0 300 aaKnown RBP6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 TIMMDC1Q9NPL8 285 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 TRMT1Q9NXH9 659 aaKnown RBP6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 KCMF1Q9P0J7 381 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 HCN3Q9P1Z3 774 aa6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 KLHL8Q9P2G9 620 aaPredicted RBP6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 LIMA1Q9UHB6 759 aaKnown RBP6.8□□□□□ -1.32
SPTLC1-205ENST00000477888 ZNF407Q9C0G0 2248 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 KDM4EB2RXH2 506 aaPredicted RBP6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 SGK494L7N484 410 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 SPRY1O43609 319 aaPredicted RBP6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 CD5LO43866 347 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 HCN1O60741 890 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 ITGA10O75578 1167 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 CDC123O75794 336 aaPredicted RBP6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 ANXA9O76027 345 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 EPPINO95925 133 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 FAM157CP0CG43 387 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 EZRP15311 586 aaKnown RBP6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 FPR1P21462 350 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 IL10P22301 178 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 PSMA3P25788 255 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 PTH2RP49190 550 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 MAN2A2P49641 1150 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 ZNF136P52737 540 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 GEMP55040 296 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 PRDX1Q06830 199 aaKnown RBP6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 KLHL30Q0D2K2 578 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 FOXO1Q12778 655 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 SLC10A1Q14973 349 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 HYAL4Q2M3T9 481 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 KCTD11Q693B1 232 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 TTC23LQ6PF05 361 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 BRICD5Q6PL45 260 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 BZW1Q7L1Q6 419 aaKnown RBP6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 PDSS2Q86YH6 399 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 APCDD1LQ8NCL9 501 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 MCOLN3Q8TDD5 553 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 SYN2Q92777 582 aaPredicted RBP6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 ISL2Q96A47 359 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 OR1F2PQ96R84 312 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 CCL19Q99731 98 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 DEFB126Q9BYW3 111 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 PLA2G12AQ9BZM1 189 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 ARNT2Q9HBZ2 717 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 MRPS30Q9NP92 439 aaKnown RBP6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 NLE1Q9NVX2 485 aaPredicted RBP6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 SPRR3Q9UBC9 169 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 RSPH14Q9UHP6 348 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 TRHDEQ9UKU6 1024 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 DRG1Q9Y295 367 aaKnown RBP6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 SCN2AQ99250 2005 aa6.79□□□□□ -1.32
SPTLC1-205ENST00000477888 ATP6AP2A0A1C7CYW4 349 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 SH3D21A4FU49 640 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 SAGE2PA6NJ88 616 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 IQCF5A8MTL0 148 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 SIAH2O43255 324 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 ATP6AP2O75787 350 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 PECAM1P16284 738 aaPredicted RBP6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 IL1RNP18510 177 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 CNR1P21554 472 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 AOAHP28039 575 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 BDKRB1P46663 353 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 WNT3P56703 355 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 DYNLT1P63172 113 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 XKR6Q5GH73 641 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 TMEM214Q6NUQ4 689 aaKnown RBP6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 SUSD1Q6UWL2 747 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 VN1R4Q7Z5H5 301 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 RFX6Q8HWS3 928 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms