RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 CSF2P04141 144 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 LAMP1P11279 417 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 ZNF26P17031 533 aaPredicted RBP11.59□□□□□ -0.55
PRPF39-203ENST00000477626 BNIP2Q12982 314 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 NR1D2Q14995 579 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 DPY19L1Q2PZI1 675 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 DEPDC1Q5TB30 811 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 ENPP7Q6UWV6 458 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 PDSS2Q86YH6 399 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 EPHX4Q8IUS5 362 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 MMP21Q8N119 569 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 C16orf78Q8WTQ4 265 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 SKA2Q8WVK7 121 aaPredicted RBP11.59□□□□□ -0.55
PRPF39-203ENST00000477626 ATP6V1E2Q96A05 226 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 APOLD1Q96LR9 279 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 EBPLQ9BY08 206 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 AGPAT4Q9NRZ5 378 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 PCDHGA4Q9Y5G9 962 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 HEBP2Q9Y5Z4 205 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 FAM221BA6H8Z2 402 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 CLEC3AO75596 197 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 ACADMP11310 421 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 NME1P15531 152 aaKnown RBP11.59□□□□□ -0.55
PRPF39-203ENST00000477626 GRIA3P42263 894 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 ART3Q13508 389 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 MLC1Q15049 377 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 FBXO42Q6P3S6 717 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 RNF44Q7L0R7 432 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 CAMKK1Q8N5S9 505 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 RNF148Q8N7C7 305 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 ZNF285Q96NJ3 590 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 OR2A5Q96R48 311 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 BHLHE41Q9C0J9 482 aaPredicted RBP11.59□□□□□ -0.55
PRPF39-203ENST00000477626 CNOT11Q9UKZ1 510 aaKnown RBP11.59□□□□□ -0.55
PRPF39-203ENST00000477626 ADAMTS9Q9P2N4 1935 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 TMPRSS11DO60235 418 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 RECKO95980 971 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 CD27P26842 260 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 SLC7A1P30825 629 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 AHRP35869 848 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 ABATP80404 500 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 LIPEQ05469 1076 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 SGO1Q5FBB7 561 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 OGFOD3Q6PK18 319 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 ZNF438Q7Z4V0 828 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 SERPINA11Q86U17 422 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 SYTL1Q8IYJ3 562 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 MFSD9Q8NBP5 474 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 CLHC1Q8NHS4 586 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 UCN3Q969E3 161 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 REPS1Q96D71 796 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 PKP2Q99959 881 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 XKR8Q9H6D3 395 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 NTN4Q9HB63 628 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 SIRT3Q9NTG7 399 aaPredicted RBP11.59□□□□□ -0.55
PRPF39-203ENST00000477626 ASB4Q9Y574 426 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 PCDHB11Q9Y5F2 797 aa11.59□□□□□ -0.55
PRPF39-203ENST00000477626 NOBOXO60393 691 aa11.58□□□□□ -0.56
PRPF39-203ENST00000477626 ERN1O75460 977 aaKnown RBP11.58□□□□□ -0.56
PRPF39-203ENST00000477626 CCR8P51685 355 aa11.58□□□□□ -0.56
PRPF39-203ENST00000477626 CACHD1Q5VU97 1274 aa11.58□□□□□ -0.56
PRPF39-203ENST00000477626 TSEN54Q7Z6J9 526 aaKnown RBP11.58□□□□□ -0.56
PRPF39-203ENST00000477626 UBALD2Q8IYN6 164 aa11.58□□□□□ -0.56
PRPF39-203ENST00000477626 MS4A6EQ96DS6 147 aa11.58□□□□□ -0.56
PRPF39-203ENST00000477626 MTERF3Q96E29 417 aa11.58□□□□□ -0.56
PRPF39-203ENST00000477626 SERPINI1Q99574 410 aa11.58□□□□□ -0.56
PRPF39-203ENST00000477626 SORBS1Q9BX66 1292 aaKnown RBP11.58□□□□□ -0.56
PRPF39-203ENST00000477626 DUSP15Q9H1R2 295 aaPredicted RBP11.58□□□□□ -0.56
PRPF39-203ENST00000477626 KLHL31Q9H511 634 aa11.58□□□□□ -0.56
PRPF39-203ENST00000477626 IL21RQ9HBE5 538 aa11.58□□□□□ -0.56
PRPF39-203ENST00000477626 TMEM74BQ9NUR3 256 aa11.58□□□□□ -0.56
PRPF39-203ENST00000477626 TMEM184CQ9NVA4 438 aa11.58□□□□□ -0.56
PRPF39-203ENST00000477626 FAM120CQ9NX05 1096 aaKnown RBP11.58□□□□□ -0.56
PRPF39-203ENST00000477626 C6orf203Q9P0P8 240 aaPredicted RBP11.58□□□□□ -0.56
PRPF39-203ENST00000477626 ANKMY1Q9P2S6 941 aa11.58□□□□□ -0.56
PRPF39-203ENST00000477626 FER1L5A0AVI2 2057 aa11.58□□□□□ -0.56
PRPF39-203ENST00000477626 FEZF1A0PJY2 475 aa11.58□□□□□ -0.56
PRPF39-203ENST00000477626 FAM170BA6NMN3 283 aa11.58□□□□□ -0.56
PRPF39-203ENST00000477626 ZNF839A8K0R7 811 aa11.58□□□□□ -0.56
PRPF39-203ENST00000477626 GIPC1O14908 333 aa11.58□□□□□ -0.56
PRPF39-203ENST00000477626 ANGPT2O15123 496 aa11.58□□□□□ -0.56
PRPF39-203ENST00000477626 BMP2P12643 396 aa11.58□□□□□ -0.56
PRPF39-203ENST00000477626 MAGEA2P43356 314 aa11.58□□□□□ -0.56
PRPF39-203ENST00000477626 GSTM5P46439 218 aa11.58□□□□□ -0.56
PRPF39-203ENST00000477626 TRPC1P48995 793 aa11.58□□□□□ -0.56
PRPF39-203ENST00000477626 ZNF763Q0D2J5 394 aa11.58□□□□□ -0.56
PRPF39-203ENST00000477626 ZFP1Q6P2D0 407 aa11.58□□□□□ -0.56
PRPF39-203ENST00000477626 SHISA5Q8N114 240 aa11.58□□□□□ -0.56
PRPF39-203ENST00000477626 MFSD2AQ8NA29 543 aa11.58□□□□□ -0.56
PRPF39-203ENST00000477626 ZFP90Q8TF47 636 aa11.58□□□□□ -0.56
PRPF39-203ENST00000477626 TBC1D17Q9HA65 648 aa11.58□□□□□ -0.56
PRPF39-203ENST00000477626 PPM1DO15297 605 aa11.57□□□□□ -0.56
PRPF39-203ENST00000477626 PTX3P26022 381 aaPredicted RBP11.57□□□□□ -0.56
PRPF39-203ENST00000477626 GPR18Q14330 331 aa11.57□□□□□ -0.56
PRPF39-203ENST00000477626 DUOXA1Q1HG43 343 aa11.57□□□□□ -0.56
PRPF39-203ENST00000477626 PAGE2BQ5JRK9 111 aa11.57□□□□□ -0.56
PRPF39-203ENST00000477626 AP1ARQ63HQ0 302 aa11.57□□□□□ -0.56
PRPF39-203ENST00000477626 APOBEC4Q8WW27 367 aaKnown RBP11.57□□□□□ -0.56
PRPF39-203ENST00000477626 FERD3LQ96RJ6 166 aa11.57□□□□□ -0.56
PRPF39-203ENST00000477626 REXO4Q9GZR2 422 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms