RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 OR4C15Q8NGM1 316 aa6.63□□□□□ -1.35
UBR4-212ENST00000475973 OR2T29Q8NH02 315 aa6.63□□□□□ -1.35
UBR4-212ENST00000475973 FCGR1BQ92637 280 aa6.63□□□□□ -1.35
UBR4-212ENST00000475973 SMARCD2Q92925 531 aa6.63□□□□□ -1.35
UBR4-212ENST00000475973 IRF7Q92985 503 aa6.63□□□□□ -1.35
UBR4-212ENST00000475973 SLC38A4Q969I6 547 aa6.63□□□□□ -1.35
UBR4-212ENST00000475973 ITCHQ96J02 903 aa6.63□□□□□ -1.35
UBR4-212ENST00000475973 HSH2DQ96JZ2 352 aa6.63□□□□□ -1.35
UBR4-212ENST00000475973 MAGEB10Q96LZ2 347 aaPredicted RBP6.63□□□□□ -1.35
UBR4-212ENST00000475973 ZBTB18Q99592 522 aa6.63□□□□□ -1.35
UBR4-212ENST00000475973 EPYCQ99645 322 aa6.63□□□□□ -1.35
UBR4-212ENST00000475973 SEPT5Q99719 369 aaPredicted RBP6.63□□□□□ -1.35
UBR4-212ENST00000475973 IER2Q9BTL4 223 aa6.63□□□□□ -1.35
UBR4-212ENST00000475973 RPP25Q9BUL9 199 aaKnown RBP6.63□□□□□ -1.35
UBR4-212ENST00000475973 TRMT61BQ9BVS5 477 aaKnown RBP6.63□□□□□ -1.35
UBR4-212ENST00000475973 CINPQ9BW66 212 aaPredicted RBP6.63□□□□□ -1.35
UBR4-212ENST00000475973 SLC12A9Q9BXP2 914 aa6.63□□□□□ -1.35
UBR4-212ENST00000475973 FAM126AQ9BYI3 521 aaPredicted RBP6.63□□□□□ -1.35
UBR4-212ENST00000475973 ACPTQ9BZG2 426 aa6.63□□□□□ -1.35
UBR4-212ENST00000475973 DPY30Q9C005 99 aa6.63□□□□□ -1.35
UBR4-212ENST00000475973 MMP27Q9H306 513 aa6.63□□□□□ -1.35
UBR4-212ENST00000475973 CCSER2Q9H7U1 834 aa6.63□□□□□ -1.35
UBR4-212ENST00000475973 LRTM1Q9HBL6 345 aa6.63□□□□□ -1.35
UBR4-212ENST00000475973 SPATA6Q9NWH7 488 aaPredicted RBP6.63□□□□□ -1.35
UBR4-212ENST00000475973 ZMYM5Q9UJ78 669 aa6.63□□□□□ -1.35
UBR4-212ENST00000475973 DNMT3LQ9UJW3 386 aa6.63□□□□□ -1.35
UBR4-212ENST00000475973 SAMD4AQ9UPU9 718 aaKnown RBP6.63□□□□□ -1.35
UBR4-212ENST00000475973 DLGAP4Q9Y2H0 992 aa6.63□□□□□ -1.35
UBR4-212ENST00000475973 PADI2Q9Y2J8 665 aa6.63□□□□□ -1.35
UBR4-212ENST00000475973 PCDHGB3Q9Y5G1 929 aa6.63□□□□□ -1.35
UBR4-212ENST00000475973 PCDHGA3Q9Y5H0 932 aa6.63□□□□□ -1.35
UBR4-212ENST00000475973 PRSS21Q9Y6M0 314 aa6.63□□□□□ -1.35
UBR4-212ENST00000475973 C1orf226A1L170 272 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 TMEM247A6NEH6 219 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 FAM170BA6NMN3 283 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 SLC38A8A6NNN8 435 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 RGS13O14921 159 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 SEC14L5O43304 696 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 XPNPEP2O43895 674 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 NOBOXO60393 691 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 SOCS5O75159 536 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 CNOT3O75175 753 aaKnown RBP6.62□□□□□ -1.35
UBR4-212ENST00000475973 ULK1O75385 1050 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 ZNF821O75541 412 aaPredicted RBP6.62□□□□□ -1.35
UBR4-212ENST00000475973 GCM2O75603 506 aaPredicted RBP6.62□□□□□ -1.35
UBR4-212ENST00000475973 STC2O76061 302 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 OLFM2O95897 454 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 SERPINA1P01009 418 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 TRBC1P01850 177 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 MT-ND2P03891 347 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 MPC1LP0DKB6 136 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 PCNAP12004 261 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 NCF1P14598 390 aaPredicted RBP6.62□□□□□ -1.35
UBR4-212ENST00000475973 SLC2A4P14672 509 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 AMD1P17707 334 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 CTPS1P17812 591 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 SDC1P18827 310 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 IGFBP5P24593 272 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 NFKBIAP25963 317 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 ACRV1P26436 265 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 MSX1P28360 303 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 GDI1P31150 447 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 KDELR2P33947 212 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 HOXD12P35452 270 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 ATP5C1P36542 298 aaKnown RBP6.62□□□□□ -1.35
UBR4-212ENST00000475973 CASP2P42575 452 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 RXRGP48443 463 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 PPP3CCP48454 512 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 HSPA7P48741 367 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 SLC11A2P49281 568 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 RGS4P49798 205 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 MVDP53602 400 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 RPS24P62847 133 aaKnown RBP6.62□□□□□ -1.35
UBR4-212ENST00000475973 RPL38P63173 70 aaKnown RBP6.62□□□□□ -1.35
UBR4-212ENST00000475973 OCA2Q04671 838 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 SRSF11Q05519 484 aaKnown RBP6.62□□□□□ -1.35
UBR4-212ENST00000475973 DUSP4Q13115 394 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 SLC14A1Q13336 389 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 NFATC2Q13469 925 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 TEAD2Q15562 447 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 IMPG1Q17R60 797 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 ARSJQ5FYB0 599 aaPredicted RBP6.62□□□□□ -1.35
UBR4-212ENST00000475973 FAM78AQ5JUQ0 283 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 ADGRF1Q5T601 910 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 CACHD1Q5VU97 1274 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 RNLSQ5VYX0 342 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 KIAA1614Q5VZ46 1190 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 GRAMD4Q6IC98 578 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 TANGO2Q6ICL3 276 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 SPESP1Q6UW49 350 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 Q6ZNB5 142 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 CCDC80Q76M96 950 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 SLC46A3Q7Z3Q1 461 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 P2RY8Q86VZ1 359 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 NLRP8Q86W28 1048 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 SERPINA9Q86WD7 417 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 ZDHHC21Q8IVQ6 265 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 TCAIMQ8N3R3 496 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 SVOPQ8N4V2 548 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 KRTCAP2Q8N6L1 136 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms