RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 RBCK1Q9BYM8 510 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.61□□□□□ -1.35
HDAC3-207ENST00000475549 KLHL31Q9H511 634 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 TRMT1Q9NXH9 659 aaKnown RBP6.61□□□□□ -1.35
HDAC3-207ENST00000475549 ANKRD10Q9NXR5 420 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 ARL15Q9NXU5 204 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 ABI3Q9P2A4 366 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 TEX264Q9Y6I9 313 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 OTOGQ6ZRI0 2925 aa6.61□□□□□ -1.35
HDAC3-207ENST00000475549 APCP25054 2843 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 A0A1B0GUH1 482 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 MAGEB17A8MXT2 336 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 FAM227AF5H4B4 570 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 CDC7O00311 574 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 CES2O00748 559 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 NDUFS4O43181 175 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 ZNHIT1O43257 154 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 OR1F1O43749 312 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 PRAMEF2O60811 474 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 NEURL1O76050 574 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 RASAL1O95294 804 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 TTC4O95801 387 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 GUCA1CO95843 209 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 TBX6O95947 436 aaPredicted RBP6.6□□□□□ -1.35
HDAC3-207ENST00000475549 CYC1P08574 325 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 HIST1H2AGP0C0S8 130 aaPredicted RBP6.6□□□□□ -1.35
HDAC3-207ENST00000475549 ZNF888P0CJ79 500 aaPredicted RBP6.6□□□□□ -1.35
HDAC3-207ENST00000475549 SMIM10L1P0DMW3 83 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 HIST1H2ADP20671 130 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 SCTRP47872 440 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 CCR8P51685 355 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 IL2P60568 153 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 BTG2P78543 158 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 PWP1Q13610 501 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 ZNF460Q14592 562 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 FASTKD3Q14CZ7 662 aaKnown RBP6.6□□□□□ -1.35
HDAC3-207ENST00000475549 ABRAXAS2Q15018 415 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 NSDHLQ15738 373 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 C18orf21Q32NC0 220 aaPredicted RBP6.6□□□□□ -1.35
HDAC3-207ENST00000475549 MFSD4BQ5TF39 518 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 STEAP4Q687X5 459 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 LRRC8EQ6NSJ5 796 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 GFRALQ6UXV0 394 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 KIAA0408Q6ZU52 694 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 STRA8Q7Z7C7 330 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 CRLF3Q8IUI8 442 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 CHERPQ8IWX8 916 aaKnown RBP6.6□□□□□ -1.35
HDAC3-207ENST00000475549 MYO1HQ8N1T3 1032 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 KIF2BQ8N4N8 673 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 GPATCH11Q8N954 259 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 CAMKVQ8NCB2 501 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 DNAJB8Q8NHS0 232 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 M1APQ8TC57 530 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 ELP5Q8TE02 316 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 ADAMTS18Q8TE60 1221 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 UTP15Q8TED0 518 aaKnown RBP6.6□□□□□ -1.35
HDAC3-207ENST00000475549 CREB3L4Q8TEY5 395 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 GRK7Q8WTQ7 553 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 ANKRD49Q8WVL7 239 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 ITLN2Q8WWU7 325 aaPredicted RBP6.6□□□□□ -1.35
HDAC3-207ENST00000475549 FBXL8Q96CD0 374 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 CCDC120Q96HB5 630 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 PDLIM5Q96HC4 596 aaKnown RBP6.6□□□□□ -1.35
HDAC3-207ENST00000475549 SMIM10Q96HG1 83 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 HIST1H2AHQ96KK5 128 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 OR1F2PQ96R84 312 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 HIST1H2AJQ99878 128 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 H2AFJQ9BTM1 129 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 UNKQ9C0B0 810 aaKnown RBP6.6□□□□□ -1.35
HDAC3-207ENST00000475549 ANKHQ9HCJ1 492 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 MMP25Q9NPA2 562 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 PPANQ9NQ55 473 aaKnown RBP6.6□□□□□ -1.35
HDAC3-207ENST00000475549 MOCS1Q9NZB8 636 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 ASIC3Q9UHC3 531 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 ENTPD4Q9Y227 616 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 CLDN16Q9Y5I7 305 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 ABCA12Q86UK0 2595 aa6.6□□□□□ -1.35
HDAC3-207ENST00000475549 ANKRD12Q6UB98 2062 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 CNTRLQ7Z7A1 2325 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 IGKV3D-11A0A0A0MRZ8 115 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 TRGV8A0A0C4DH27 118 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 TRBC2A0A5B9 178 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 ARHGAP10A1A4S6 786 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 ASPDHA6ND91 283 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 PRAMEF4O60810 478 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 B4GALT2O60909 372 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 WISP3O95389 354 aaPredicted RBP6.59□□□□□ -1.35
HDAC3-207ENST00000475549 FHP07954 510 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 ZNF37AP17032 561 aaPredicted RBP6.59□□□□□ -1.35
HDAC3-207ENST00000475549 ALOX12P18054 663 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 MAOAP21397 527 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 CCND1P24385 295 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 HNF4AP41235 474 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 GDF5P43026 501 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 RGS4P49798 205 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 ITGA8P53708 1063 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 AP1S2P56377 157 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 SLC26A5P58743 744 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 TAS2R39P59534 338 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 RAB8AP61006 207 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms