RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 SIAEQ9HAT2 523 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 MRPS30Q9NP92 439 aaKnown RBP9.33□□□□□ -0.92
CDH23-211ENST00000475158 TRBC2A0A5B9 178 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 NDUFS4O43181 175 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 PDYNP01213 254 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 ARSFP54793 590 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 DNAJB13P59910 316 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 CDK6Q00534 326 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.33□□□□□ -0.92
CDH23-211ENST00000475158 BPIFB1Q8TDL5 484 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 KHSRPQ92945 711 aaKnown RBP eCLIP9.33□□□□□ -0.92
CDH23-211ENST00000475158 FUBP1Q96AE4 644 aaKnown RBP9.33□□□□□ -0.92
CDH23-211ENST00000475158 ZBED6CLQ96FA7 236 aaPredicted RBP9.33□□□□□ -0.92
CDH23-211ENST00000475158 C3orf30Q96M34 536 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 CLDND1Q9NY35 253 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 FNIP2Q9P278 1114 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 CRNNQ9UBG3 495 aaPredicted RBP9.33□□□□□ -0.92
CDH23-211ENST00000475158 ING4Q9UNL4 249 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 HSPB11Q9Y547 144 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 ATG2BQ96BY7 2078 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 FAM240BA0A1B0GVZ2 78 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 ISPDA4D126 451 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 SAGE2PA6NJ88 616 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 A8MUA0 341 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 NME4O00746 187 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 SLC10A3P09131 477 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 BPIP17213 487 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 C4BPBP20851 252 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 CMPK1P30085 196 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 SLC6A4P31645 630 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 VIPR1P32241 457 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 ERVPABLB-1P60509 514 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 SF3B4Q15427 424 aaKnown RBP eCLIP9.33□□□□□ -0.92
CDH23-211ENST00000475158 TEAD4Q15561 434 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 AMZ1Q400G9 498 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 NOXRED1Q6NXP6 359 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 TOR1AIP2Q8NFQ8 470 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 CNIH3Q8TBE1 160 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 CCM2Q9BSQ5 444 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 EFCAB11Q9BUY7 163 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 RBCK1Q9BYM8 510 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 C5AR2Q9P296 337 aa9.33□□□□□ -0.92
CDH23-211ENST00000475158 ZNF282Q9UDV7 671 aaPredicted RBP9.33□□□□□ -0.92
CDH23-211ENST00000475158 ICE1Q9Y2F5 2266 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 CARNS1A5YM72 827 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 EBLN1P0CF75 366 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 TYRP1P17643 537 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 TNFRSF1BP20333 461 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 HMGCLP35914 325 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 RAB25P57735 213 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 GK3PQ14409 553 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 MORN1Q5T089 497 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 LETMD1Q6P1Q0 360 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 RNF130Q86XS8 419 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 GPR135Q8IZ08 494 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 LRRC17Q8N6Y2 441 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 TMEM175Q9BSA9 504 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 RPF2Q9H7B2 306 aaKnown RBP9.32□□□□□ -0.92
CDH23-211ENST00000475158 THUMPD1Q9NXG2 353 aaKnown RBP9.32□□□□□ -0.92
CDH23-211ENST00000475158 PCDHGB3Q9Y5G1 929 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 LOC100130705A0A1B0GUX0 176 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 PRSS51A0A1B0GVH4 220 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 EFCAB9A8MZ26 197 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 YES1P07947 543 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 GABRB3P28472 473 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 PTGER1P34995 402 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 CTSOP43234 321 aaPredicted RBP9.32□□□□□ -0.92
CDH23-211ENST00000475158 MYBPC1Q00872 1141 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 PKDCCQ504Y2 493 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 PAGE3Q5JUK9 113 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 DUS1LQ6P1R4 473 aaKnown RBP9.32□□□□□ -0.92
CDH23-211ENST00000475158 FAM171BQ6P995 826 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 VTCN1Q7Z7D3 282 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 CLECL1Q8IZS7 167 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 HS3ST5Q8IZT8 346 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 FAM46DQ8NEK8 389 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 PXYLP1Q8TE99 480 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 C11orf24Q96F05 449 aaPredicted RBP9.32□□□□□ -0.92
CDH23-211ENST00000475158 SLC29A1Q99808 456 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 GINS4Q9BRT9 223 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 TTTY10Q9BZA0 68 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 KAT8Q9H7Z6 458 aaKnown RBP9.32□□□□□ -0.92
CDH23-211ENST00000475158 ELL3Q9HB65 397 aaPredicted RBP9.32□□□□□ -0.92
CDH23-211ENST00000475158 COMMD3Q9UBI1 195 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 RIMKLBQ9ULI2 386 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 MRPS33Q9Y291 106 aaKnown RBP9.32□□□□□ -0.92
CDH23-211ENST00000475158 STX16O14662 325 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 SLC25A12O75746 678 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 TFPIP10646 304 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 CHRNB1P11230 501 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 PRR5P85299 388 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 MLLT1Q03111 559 aaPredicted RBP9.32□□□□□ -0.92
CDH23-211ENST00000475158 FPGSQ05932 587 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 RAB39AQ14964 217 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 LARS2Q15031 903 aaKnown RBP9.32□□□□□ -0.92
CDH23-211ENST00000475158 CRTC2Q53ET0 693 aaPredicted RBP9.32□□□□□ -0.92
CDH23-211ENST00000475158 RTL4Q6ZR62 310 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 CYS1Q717R9 158 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 OR10H4Q8NGA5 316 aa9.32□□□□□ -0.92
CDH23-211ENST00000475158 MAL2Q969L2 176 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms