RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 SLC16A8O95907 504 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 GAS8O95995 478 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 STATHP02808 62 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 TPOP07202 933 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 IL1RNP18510 177 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 RPS3P23396 243 aaKnown RBP eCLIP4.81□□□□□ -1.644e-9■■■■□ 19.6
SNRNP40-204ENST00000474025 ADRA1DP25100 572 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 TPP2P29144 1249 aaPredicted RBP4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 ATP5DP30049 168 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 RFC3P40938 356 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 BCL6P41182 706 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 MAGEA1P43355 309 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 CYB561P49447 251 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 PNLIPRP1P54315 467 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 RWDD2BP57060 319 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 SLC26A5P58743 744 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 TAS2R50P59544 299 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 MYBPHQ13203 477 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 KLF1Q13351 362 aaPredicted RBP4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 USP10Q14694 798 aaKnown RBP4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 ARHGAP19Q14CB8 494 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 ABRAXAS2Q15018 415 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 NSDHLQ15738 373 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 CEBPEQ15744 281 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 NDUFA9Q16795 377 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 ANKRD20A4Q4UJ75 823 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 SFT2D3Q587I9 215 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 CMPK2Q5EBM0 449 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 EMC4Q5J8M3 183 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 CTSL3PQ5NE16 218 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 CES4AQ5XG92 561 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 TMEM211Q6ICI0 200 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 TMEM214Q6NUQ4 689 aaKnown RBP4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 ADCK2Q7Z695 626 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 RPS19BP1Q86WX3 136 aaKnown RBP4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 LRRC6Q86X45 466 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 PDSS2Q86YH6 399 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 CCDC71Q8IV32 467 aaPredicted RBP4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 VSTM4Q8IW00 320 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 MPP5Q8N3R9 675 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 KIF2BQ8N4N8 673 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 POGLUT1Q8NBL1 392 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 PPFIBP2Q8ND30 876 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 SLC35B2Q8TB61 432 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 ELP5Q8TE02 316 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 RND1Q92730 232 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 PEX13Q92968 403 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 TSLPQ969D9 159 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 BIRC8Q96P09 236 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 PKP4Q99569 1192 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 LPAR4Q99677 370 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 RBCK1Q9BYM8 510 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 TP63Q9H3D4 680 aaPredicted RBP4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 LIME1Q9H400 295 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 CDCP1Q9H5V8 836 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 LANCL2Q9NS86 450 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 UTP6Q9NYH9 597 aaKnown RBP4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 ST6GALNAC2Q9UJ37 374 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 L3MBTL1Q9Y468 752 aa4.81□□□□□ -1.64
SNRNP40-204ENST00000474025 KCNE1BA0A087WTH5 132 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 FAM237BA0A1B0GVD1 139 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 TCRBV7S2A1N4TA0A589 114 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 GOLGA6L9A6NEM1 432 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 ZNF860A6NHJ4 632 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 ZNF839A8K0R7 811 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 MAGEB17A8MXT2 336 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 E7ENX8 843 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 H7BY64 318 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 KLK8O60259 260 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 KIF5CO60282 957 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 CDC40O60508 579 aaKnown RBP eCLIP4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 PRMT3O60678 531 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 NIPSNAP2O75323 286 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 RDH16O75452 317 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 NDUFS3O75489 264 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 CTAG2O75638 210 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 CDC123O75794 336 aaPredicted RBP4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 CATP04040 527 aaKnown RBP4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 TPM1P09493 284 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 TFEBP19484 476 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 ARNTP27540 789 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 TRHRP34981 398 aaPredicted RBP4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 GPC1P35052 558 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 HSD17B2P37059 387 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 CETN2P41208 172 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 MEOX1P50221 254 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 HLCSP50747 726 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 RNF144AP50876 292 aaPredicted RBP4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 NR0B1P51843 470 aaKnown RBP4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 ITGA8P53708 1063 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 EIF3BP55884 814 aaKnown RBP4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 DLX5P56178 289 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 NUP107P57740 925 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 OR4D2P58180 307 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 MLF1P58340 268 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 RPS15AP62244 130 aaKnown RBP4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 ABATP80404 500 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 MPP1Q00013 466 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 TAP2Q03519 686 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 ACTN3Q08043 901 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms