RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 PPP6CO00743 305 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 PLPP2O43688 288 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 SSX4O60224 188 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 RTN2O75298 545 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 CIAO1O76071 339 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 GOSR1O95249 250 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 NTN1O95631 604 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 RLN1P04808 185 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 LINGO3P0C6S8 592 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 SNHG28P0DPA3 235 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 NAGAP17050 411 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 CHRNB2P17787 502 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 NR2F2P24468 414 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 AZGP1P25311 298 aaKnown RBP2.24□□□□□ -2.05
CALD1-216ENST00000473714 ACADLP28330 430 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 DCTDP32321 178 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 KRT2P35908 639 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 LEPRP48357 1165 aaKnown RBP2.24□□□□□ -2.05
CALD1-216ENST00000473714 GLUD2P49448 558 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 ACADVLP49748 655 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 RAD23BP54727 409 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 P2RX3P56373 397 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 BNC1Q01954 994 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 DNAJC3Q13217 504 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 UBE2V1Q13404 147 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 PTPRCAPQ14761 206 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 MVPQ14764 893 aaKnown RBP2.24□□□□□ -2.05
CALD1-216ENST00000473714 MORF4L2Q15014 288 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 INPP5JQ15735 1006 aaPredicted RBP2.24□□□□□ -2.05
CALD1-216ENST00000473714 STXBP2Q15833 593 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 HLA-BQ31612 363 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 MYLK3Q32MK0 819 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 C2orf76Q3KRA6 126 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 FSCBQ5H9T9 825 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 MTX3Q5HYI7 312 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 LRRC73Q5JTD7 316 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 KCNT1Q5JUK3 1230 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 LIN9Q5TKA1 542 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 OTUD1Q5VV17 481 aaPredicted RBP2.24□□□□□ -2.05
CALD1-216ENST00000473714 DCAF12L2Q5VW00 463 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 ALS2CLQ60I27 953 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 CASC4Q6P4E1 433 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 ZNF449Q6P9G9 518 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 BHLHB9Q6PI77 547 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 SUSD1Q6UWL2 747 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 RBPMS2Q6ZRY4 209 aaKnown RBP2.24□□□□□ -2.05
CALD1-216ENST00000473714 OTOAQ7RTW8 1153 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 PIWIL3Q7Z3Z3 882 aaKnown RBP2.24□□□□□ -2.05
CALD1-216ENST00000473714 FAM228AQ86W67 206 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 ZC3HC1Q86WB0 502 aaKnown RBP2.24□□□□□ -2.05
CALD1-216ENST00000473714 NDUFAF2Q8N183 169 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 SEMA6DQ8NFY4 1073 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 WDR20Q8TBZ3 569 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 ZNF398Q8TD17 642 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 TRPC4APQ8TEL6 797 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 HASPINQ8TF76 798 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 CHURC1Q8WUH1 139 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 SDR42E1Q8WUS8 393 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 ZFAND2BQ8WV99 257 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 UBLCP1Q8WVY7 318 aaPredicted RBP2.24□□□□□ -2.05
CALD1-216ENST00000473714 TMEM158Q8WZ71 300 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 KRT35Q92764 455 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 SNAPC3Q92966 411 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 SLAMF9Q96A28 289 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 TBC1D31Q96DN5 1066 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 MTBPQ96DY7 904 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 MTERF3Q96E29 417 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 BSCL2Q96G97 398 aaPredicted RBP2.24□□□□□ -2.05
CALD1-216ENST00000473714 TXNDC15Q96J42 360 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 EGLN2Q96KS0 407 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 B3GALT6Q96L58 329 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 FAM81BQ96LP2 452 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 RMDN2Q96LZ7 410 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 TAAR1Q96RJ0 339 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 SIGLEC11Q96RL6 698 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 P2RY13Q9BPV8 354 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 SLX1AQ9BQ83 275 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 TMEM79Q9BSE2 394 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 FUT8Q9BYC5 575 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 ISCUQ9H1K1 167 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 CXXC4Q9H2H0 198 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 FOXP1Q9H334 677 aaPredicted RBP2.24□□□□□ -2.05
CALD1-216ENST00000473714 ST6GALNAC4Q9H4F1 302 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 MKKSQ9NPJ1 570 aaPredicted RBP2.24□□□□□ -2.05
CALD1-216ENST00000473714 OLAHQ9NV23 265 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 TBC1D13Q9NVG8 400 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 MARCH5Q9NX47 278 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 ERAP1Q9NZ08 941 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 MSRB1Q9NZV6 116 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 AKAP7Q9P0M2 348 aaPredicted RBP2.24□□□□□ -2.05
CALD1-216ENST00000473714 SEPT10Q9P0V9 454 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 VPS18Q9P253 973 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 CRNNQ9UBG3 495 aaPredicted RBP2.24□□□□□ -2.05
CALD1-216ENST00000473714 ARPP21Q9UBL0 812 aaPredicted RBP2.24□□□□□ -2.05
CALD1-216ENST00000473714 DNAJB9Q9UBS3 223 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 CLIP2Q9UDT6 1046 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 FBXL2Q9UKC9 423 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 ITGA11Q9UKX5 1188 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 GINS2Q9Y248 185 aa2.24□□□□□ -2.05
CALD1-216ENST00000473714 KCNK7Q9Y2U2 307 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms