RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 PRSS33Q8NF86 280 aa4.73□□□□□ -1.65
CLK1-209ENST00000472679 GTF3AQ92664 365 aaKnown RBP4.73□□□□□ -1.65
CLK1-209ENST00000472679 SH3GLB2Q9NR46 395 aa4.73□□□□□ -1.65
CLK1-209ENST00000472679 NUDT4Q9NZJ9 180 aa4.73□□□□□ -1.65
CLK1-209ENST00000472679 PAK5Q9P286 719 aa4.73□□□□□ -1.65
CLK1-209ENST00000472679 SLC12A6Q9UHW9 1150 aa4.73□□□□□ -1.65
CLK1-209ENST00000472679 NOCTQ9UK39 431 aaKnown RBP4.73□□□□□ -1.65
CLK1-209ENST00000472679 ITGA11Q9UKX5 1188 aa4.73□□□□□ -1.65
CLK1-209ENST00000472679 CACNA1FO60840 1977 aa4.73□□□□□ -1.65
CLK1-209ENST00000472679 NPHP3Q7Z494 1330 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 ANTXRLA6NF34 631 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 E9PQ18 207 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 NPIPA3F8WFD2 350 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 SURF4O15260 269 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 IDH3BO43837 385 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 CRLF1O75462 422 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 GOT1P17174 413 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 CASTP20810 708 aaKnown RBP4.72□□□□□ -1.65
CLK1-209ENST00000472679 PDHA2P29803 388 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 BTG1P62324 171 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 FASTKD3Q14CZ7 662 aaKnown RBP4.72□□□□□ -1.65
CLK1-209ENST00000472679 MTHFSDQ2M296 383 aaKnown RBP4.72□□□□□ -1.65
CLK1-209ENST00000472679 TWISTNBQ3B726 338 aaPredicted RBP4.72□□□□□ -1.65
CLK1-209ENST00000472679 ALDH1L2Q3SY69 923 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 C2CD6Q53TS8 623 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 FGD3Q5JSP0 725 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 ATP1A1-AS1Q5TC04 95 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 COX8CQ7Z4L0 72 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 KLHL7Q8IXQ5 586 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 NKAIN3Q8N8D7 197 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 NHLRC2Q8NBF2 726 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 Q8NBF4 154 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 ATP8B4Q8TF62 1192 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 GRK7Q8WTQ7 553 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 OMA1Q96E52 524 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 ATXN7L3BQ96GX2 97 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 CCDC114Q96M63 670 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 PRICKLE1Q96MT3 831 aaPredicted RBP4.72□□□□□ -1.65
CLK1-209ENST00000472679 ATOH8Q96SQ7 321 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 ADPGKQ9BRR6 497 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 UBQLN3Q9H347 655 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 B3GAT2Q9NPZ5 323 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 TEX10Q9NXF1 929 aaPredicted RBP4.72□□□□□ -1.65
CLK1-209ENST00000472679 POLKQ9UBT6 870 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 GTF3C4Q9UKN8 822 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 PA2G4Q9UQ80 394 aaKnown RBP4.72□□□□□ -1.65
CLK1-209ENST00000472679 WIPI2Q9Y4P8 454 aa4.72□□□□□ -1.65
CLK1-209ENST00000472679 YDJCA8MPS7 323 aa4.71□□□□□ -1.66
CLK1-209ENST00000472679 EPM2AB3EWF7 344 aa4.71□□□□□ -1.66
CLK1-209ENST00000472679 IFIT3O14879 490 aaKnown RBP4.71□□□□□ -1.66
CLK1-209ENST00000472679 MLNRO43193 412 aa4.71□□□□□ -1.66
CLK1-209ENST00000472679 MT-ND2P03891 347 aa4.71□□□□□ -1.66
CLK1-209ENST00000472679 SELEP16581 610 aa4.71□□□□□ -1.66
CLK1-209ENST00000472679 TMEM50BP56557 158 aa4.71□□□□□ -1.66
CLK1-209ENST00000472679 ENPP2Q13822 863 aa4.71□□□□□ -1.66
CLK1-209ENST00000472679 FAM106AQ4KMX7 169 aa4.71□□□□□ -1.66
CLK1-209ENST00000472679 TAF1BQ53T94 588 aaPredicted RBP4.71□□□□□ -1.66
CLK1-209ENST00000472679 HECTD3Q5T447 861 aa4.71□□□□□ -1.66
CLK1-209ENST00000472679 KLHL10Q6JEL2 608 aa4.71□□□□□ -1.66
CLK1-209ENST00000472679 KRT77Q7Z794 578 aa4.71□□□□□ -1.66
CLK1-209ENST00000472679 ZER1Q7Z7L7 766 aa4.71□□□□□ -1.66
CLK1-209ENST00000472679 PHLDB2Q86SQ0 1253 aa4.71□□□□□ -1.66
CLK1-209ENST00000472679 TDHQ8IZJ6 230 aa4.71□□□□□ -1.66
CLK1-209ENST00000472679 OR4D10Q8NGI6 311 aa4.71□□□□□ -1.66
CLK1-209ENST00000472679 SAP25Q8TEE9 199 aa4.71□□□□□ -1.66
CLK1-209ENST00000472679 TSSK2Q96PF2 358 aa4.71□□□□□ -1.66
CLK1-209ENST00000472679 PARK7Q99497 189 aaKnown RBP4.71□□□□□ -1.66
CLK1-209ENST00000472679 RBM4BQ9BQ04 359 aaKnown RBP4.71□□□□□ -1.66
CLK1-209ENST00000472679 TRIM51Q9BSJ1 452 aa4.71□□□□□ -1.66
CLK1-209ENST00000472679 MTHFD2LQ9H903 347 aaPredicted RBP4.71□□□□□ -1.66
CLK1-209ENST00000472679 GRPEL1Q9HAV7 217 aa4.71□□□□□ -1.66
CLK1-209ENST00000472679 LNPEPQ9UIQ6 1025 aa4.71□□□□□ -1.66
CLK1-209ENST00000472679 GMEB2Q9UKD1 530 aa4.71□□□□□ -1.66
CLK1-209ENST00000472679 A0A0B4J203 849 aa4.7□□□□□ -1.66
CLK1-209ENST00000472679 SLC30A4O14863 429 aa4.7□□□□□ -1.66
CLK1-209ENST00000472679 PGRMC2O15173 223 aa4.7□□□□□ -1.66
CLK1-209ENST00000472679 ACSL4O60488 711 aa4.7□□□□□ -1.66
CLK1-209ENST00000472679 SUPT20HL2P0C7V6 817 aa4.7□□□□□ -1.66
CLK1-209ENST00000472679 TRIM49P0CI25 452 aa4.7□□□□□ -1.66
CLK1-209ENST00000472679 TRIM49CP0CI26 452 aa4.7□□□□□ -1.66
CLK1-209ENST00000472679 MYOGP15173 224 aa4.7□□□□□ -1.66
CLK1-209ENST00000472679 DHODHQ02127 395 aa4.7□□□□□ -1.66
CLK1-209ENST00000472679 LY6DQ14210 128 aa4.7□□□□□ -1.66
CLK1-209ENST00000472679 LPAL2Q16609 132 aa4.7□□□□□ -1.66
CLK1-209ENST00000472679 SNAI3Q3KNW1 292 aa4.7□□□□□ -1.66
CLK1-209ENST00000472679 NHSL2Q5HYW2 709 aa4.7□□□□□ -1.66
CLK1-209ENST00000472679 STXBP4Q6ZWJ1 553 aa4.7□□□□□ -1.66
CLK1-209ENST00000472679 TAF15Q92804 592 aaKnown RBP eCLIP4.7□□□□□ -1.66
CLK1-209ENST00000472679 CASP10Q92851 521 aa4.7□□□□□ -1.66
CLK1-209ENST00000472679 AGAP4Q96P64 663 aa4.7□□□□□ -1.66
CLK1-209ENST00000472679 LSG1Q9H089 658 aaKnown RBP4.7□□□□□ -1.66
CLK1-209ENST00000472679 NDE1Q9NXR1 346 aa4.7□□□□□ -1.66
CLK1-209ENST00000472679 NCKAP1Q9Y2A7 1128 aa4.7□□□□□ -1.66
CLK1-209ENST00000472679 LOC105371242A0A075B767 164 aa4.69□□□□□ -1.66
CLK1-209ENST00000472679 A0A1W2PRQ8 180 aa4.69□□□□□ -1.66
CLK1-209ENST00000472679 CTDSPLO15194 276 aa4.69□□□□□ -1.66
CLK1-209ENST00000472679 NME6O75414 186 aaPredicted RBP4.69□□□□□ -1.66
CLK1-209ENST00000472679 LRCH4O75427 683 aa4.69□□□□□ -1.66
CLK1-209ENST00000472679 SLU7O95391 586 aaKnown RBP4.69□□□□□ -1.66
CLK1-209ENST00000472679 PIK3R1P27986 724 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms