RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 GRK3P35626 688 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 XCR1P46094 333 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 BASP1P80723 227 aaKnown RBP8.6□□□□□ -1.03
CPSF4-211ENST00000471455 MAT1AQ00266 395 aaKnown RBP8.6□□□□□ -1.03
CPSF4-211ENST00000471455 CDK16Q00536 496 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 TLE4Q04727 773 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 ACTN3Q08043 901 aaPredicted RBP8.6□□□□□ -1.03
CPSF4-211ENST00000471455 SYT16Q17RD7 645 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 TYSND1Q2T9J0 566 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 KLHL38Q2WGJ6 581 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 NIPAL1Q6NVV3 410 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 H3F3CQ6NXT2 135 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 PCGF5Q86SE9 256 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 CAMKVQ8NCB2 501 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 MDS2Q8NDY4 140 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 OR9A4Q8NGU2 314 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 OR51Q1Q8NH59 317 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 CA5BP1Q8WTZ4 195 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 SCMH1Q96GD3 660 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 HES6Q96HZ4 224 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 BIRC8Q96P09 236 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 CYTH2Q99418 400 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 PKP4Q99569 1192 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 VKORC1Q9BQB6 163 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 LACRTQ9GZZ8 138 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 MCCC2Q9HCC0 563 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 MMP25Q9NPA2 562 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 CCDC177Q9NQR7 707 aaPredicted RBP8.6□□□□□ -1.03
CPSF4-211ENST00000471455 KLHL1Q9NR64 748 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 TMEM184CQ9NVA4 438 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 INTS10Q9NVR2 710 aaKnown RBP8.6□□□□□ -1.03
CPSF4-211ENST00000471455 KLHL42Q9P2K6 505 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 NPIPA1Q9UND3 350 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 PACSIN2Q9UNF0 486 aaPredicted RBP8.6□□□□□ -1.03
CPSF4-211ENST00000471455 HIVEP1P15822 2718 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 SCN2AQ99250 2005 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 KCNE1BA0A087WTH5 132 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 TCRBV7S2A1N4TA0A589 114 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 KRT87PA6NCN2 255 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 GABRR3A8MPY1 467 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 FOXO6A8MYZ6 492 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 E7ENX8 843 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 HAT1O14929 419 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 P2RX6O15547 441 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 ASNA1O43681 348 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 ZBTB14O43829 449 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 KRT38O76015 456 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 SLC35G6P0C7Q6 338 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 CD1EP15812 388 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 JAK1P23458 1154 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 ADH7P40394 386 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 BCL6P41182 706 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 YBX1P67809 324 aaKnown RBP8.59□□□□□ -1.03
CPSF4-211ENST00000471455 SARNPP82979 210 aaKnown RBP8.59□□□□□ -1.03
CPSF4-211ENST00000471455 MEF2AQ02078 507 aaPredicted RBP8.59□□□□□ -1.03
CPSF4-211ENST00000471455 TAP2Q03519 686 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 NSDHLQ15738 373 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 KRTAP21-3Q3LHN1 58 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 ACSBG2Q5FVE4 666 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 KIAA0930Q6ICG6 404 aaPredicted RBP8.59□□□□□ -1.03
CPSF4-211ENST00000471455 SLC25A25Q6KCM7 469 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 LRRC8EQ6NSJ5 796 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 PAPD4Q6PIY7 484 aaKnown RBP8.59□□□□□ -1.03
CPSF4-211ENST00000471455 MEX3BQ6ZN04 569 aaKnown RBP8.59□□□□□ -1.03
CPSF4-211ENST00000471455 LANCL3Q6ZV70 420 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 ANKRD37Q7Z713 158 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 SLC13A5Q86YT5 568 aaPredicted RBP8.59□□□□□ -1.03
CPSF4-211ENST00000471455 CRLF3Q8IUI8 442 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 ARHGEF39Q8N4T4 335 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 POGLUT1Q8NBL1 392 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 ACRBPQ8NEB7 543 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 AGAP11Q8TF27 550 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 ZNF480Q8WV37 535 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 ASB5Q8WWX0 329 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 TMEM125Q96AQ2 219 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 FAM136AQ96C01 138 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 FRMD6Q96NE9 622 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 OR1F2PQ96R84 312 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 OLFM1Q99784 485 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 KIFC1Q9BW19 673 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 ABCF3Q9NUQ8 709 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 HCN3Q9P1Z3 774 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 ZFATQ9P243 1243 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 PPT2Q9UMR5 302 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 CRYL1Q9Y2S2 319 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 REXO2Q9Y3B8 237 aaKnown RBP8.59□□□□□ -1.03
CPSF4-211ENST00000471455 MED13LQ71F56 2210 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 PDZD2O15018 2839 aa8.59□□□□□ -1.03
CPSF4-211ENST00000471455 IGHV3-20A0A0C4DH32 117 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 PABPN1LA6NDY0 278 aaKnown RBP8.58□□□□□ -1.04
CPSF4-211ENST00000471455 MAGEB17A8MXT2 336 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 H7BY64 318 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 EIF3FO00303 357 aaPredicted RBP8.58□□□□□ -1.04
CPSF4-211ENST00000471455 NDC80O14777 642 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 SLC25A12O75746 678 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 SP1P08047 785 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 MPC1LP0DKB6 136 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 CCND1P24385 295 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 NMBRP28336 390 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 CD96P40200 585 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms