RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 MAN2B2Q9Y2E5 1009 aa17.36■□□□□ 0.37
SMC4-211ENST00000469858 NUP214P35658 2090 aaPredicted RBP17.35■□□□□ 0.37
SMC4-211ENST00000469858 TP53BP1Q12888 1972 aaPredicted RBP17.35■□□□□ 0.37
SMC4-211ENST00000469858 KIR2DS5A0A0G2JLQ3 304 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 A0A0G2JNG1 304 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 KIR2DS3K7RE56 304 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 RTCAO00442 366 aaKnown RBP17.35■□□□□ 0.37
SMC4-211ENST00000469858 LAMP1P11279 417 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 BCL6P41182 706 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 DMWDQ09019 674 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 BNIP2Q12982 314 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 KIR2DS5Q14953 304 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 SLC36A4Q6YBV0 504 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 MSANTD1Q6ZTZ1 278 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 MSRB3Q8IXL7 192 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 TMEM132CQ8N3T6 1108 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 FAM46DQ8NEK8 389 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 OR8J3Q8NGG0 315 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 OR8J2Q8NGG1 315 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 PAIP1Q9H074 479 aaKnown RBP17.35■□□□□ 0.37
SMC4-211ENST00000469858 MCM8Q9UJA3 840 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 BTBD3Q9Y2F9 522 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 A0A096LPI6 279 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 OR5K4A6NMS3 321 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 GABRR3A8MPY1 467 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 H3BNX3 289 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 TLR4O00206 839 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 RFXANKO14593 260 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 ERN1O75460 977 aaKnown RBP17.35■□□□□ 0.37
SMC4-211ENST00000469858 SEMA3DO95025 777 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 ANP32DO95626 131 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 STATHP02808 62 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 GSNP06396 782 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 PIM1P11309 404 aaPredicted RBP17.35■□□□□ 0.37
SMC4-211ENST00000469858 CDKN2CP42773 168 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 WNT3P56703 355 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 UBE2IP63279 158 aaKnown RBP17.35■□□□□ 0.37
SMC4-211ENST00000469858 CPTPQ5TA50 214 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 LRRC74BQ6ZQY2 392 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 IQCHQ86VS3 1027 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 TTLQ8NG68 377 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 DNAJB8Q8NHS0 232 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 C16orf78Q8WTQ4 265 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 SLC22A18Q96BI1 424 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 LRGUKQ96M69 825 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 DUSP26Q9BV47 211 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 CD320Q9NPF0 282 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 USP22Q9UPT9 525 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 MAPRE3Q9UPY8 281 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 PCDHB14Q9Y5E9 798 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 SPAG17Q6Q759 2223 aa17.35■□□□□ 0.37
SMC4-211ENST00000469858 GSAPA4D1B5 854 aa17.34■□□□□ 0.37
SMC4-211ENST00000469858 OR6C74A6NCV1 312 aa17.34■□□□□ 0.37
SMC4-211ENST00000469858 B4DGG1 531 aa17.34■□□□□ 0.37
SMC4-211ENST00000469858 NDUFS4O43181 175 aa17.34■□□□□ 0.37
SMC4-211ENST00000469858 CLEC3AO75596 197 aa17.34■□□□□ 0.37
SMC4-211ENST00000469858 KLHL18O94889 574 aa17.34■□□□□ 0.37
SMC4-211ENST00000469858 CSF2P04141 144 aa17.34■□□□□ 0.37
SMC4-211ENST00000469858 POLR2CP19387 275 aaPredicted RBP17.34■□□□□ 0.37
SMC4-211ENST00000469858 ATP6V1B2P21281 511 aa17.34■□□□□ 0.37
SMC4-211ENST00000469858 TAS2R50P59544 299 aa17.34■□□□□ 0.37
SMC4-211ENST00000469858 CYP4F3Q08477 520 aa17.34■□□□□ 0.37
SMC4-211ENST00000469858 KIR2DS3Q14952 304 aa17.34■□□□□ 0.37
SMC4-211ENST00000469858 LRIF1Q5T3J3 769 aa17.34■□□□□ 0.37
SMC4-211ENST00000469858 RNF111Q6ZNA4 994 aa17.34■□□□□ 0.37
SMC4-211ENST00000469858 TRIM73Q86UV7 250 aa17.34■□□□□ 0.37
SMC4-211ENST00000469858 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.34■□□□□ 0.372e-6■■■■■ 54.3
SMC4-211ENST00000469858 CREB3L4Q8TEY5 395 aa17.34■□□□□ 0.37
SMC4-211ENST00000469858 ZDHHC1Q8WTX9 485 aa17.34■□□□□ 0.37
SMC4-211ENST00000469858 NRG4Q8WWG1 115 aa17.34■□□□□ 0.37
SMC4-211ENST00000469858 MIEF2Q96C03 454 aa17.34■□□□□ 0.37
SMC4-211ENST00000469858 PRPF18Q99633 342 aaKnown RBP17.34■□□□□ 0.37
SMC4-211ENST00000469858 CENPKQ9BS16 269 aa17.34■□□□□ 0.37
SMC4-211ENST00000469858 THUMPD3Q9BV44 507 aaKnown RBP17.34■□□□□ 0.37
SMC4-211ENST00000469858 ZNF717Q9BY31 904 aaPredicted RBP17.34■□□□□ 0.37
SMC4-211ENST00000469858 IKZF5Q9H5V7 419 aa17.34■□□□□ 0.37
SMC4-211ENST00000469858 MYNNQ9NPC7 610 aa17.34■□□□□ 0.37
SMC4-211ENST00000469858 FAM120CQ9NX05 1096 aaKnown RBP17.34■□□□□ 0.37
SMC4-211ENST00000469858 SH3BP4Q9P0V3 963 aa17.34■□□□□ 0.37
SMC4-211ENST00000469858 SNX7Q9UNH6 387 aa17.34■□□□□ 0.37
SMC4-211ENST00000469858 EXO1Q9UQ84 846 aaKnown RBP17.34■□□□□ 0.37
SMC4-211ENST00000469858 TRBV5-3A0A0A0MS03 114 aa17.33■□□□□ 0.37
SMC4-211ENST00000469858 NME1P15531 152 aaKnown RBP17.33■□□□□ 0.37
SMC4-211ENST00000469858 EFNA1P20827 205 aaPredicted RBP17.33■□□□□ 0.37
SMC4-211ENST00000469858 HRH2P25021 359 aa17.33■□□□□ 0.37
SMC4-211ENST00000469858 TPP2P29144 1249 aaPredicted RBP17.33■□□□□ 0.37
SMC4-211ENST00000469858 MC1RQ01726 317 aa17.33■□□□□ 0.37
SMC4-211ENST00000469858 RUNDC3AQ59EK9 446 aa17.33■□□□□ 0.37
SMC4-211ENST00000469858 CCNYL2Q5T2Q4 361 aa17.33■□□□□ 0.37
SMC4-211ENST00000469858 ZNF425Q6IV72 752 aa17.33■□□□□ 0.37
SMC4-211ENST00000469858 ZFP1Q6P2D0 407 aa17.33■□□□□ 0.37
SMC4-211ENST00000469858 ZNF761Q86XN6 746 aaPredicted RBP17.33■□□□□ 0.37
SMC4-211ENST00000469858 TBC1D19Q8N5T2 526 aa17.33■□□□□ 0.37
SMC4-211ENST00000469858 ZFPM2Q8WW38 1151 aa17.33■□□□□ 0.37
SMC4-211ENST00000469858 AURKBQ96GD4 344 aaPredicted RBP17.33■□□□□ 0.37
SMC4-211ENST00000469858 GBP5Q96PP8 586 aa17.33■□□□□ 0.37
SMC4-211ENST00000469858 PANX1Q96RD7 426 aa17.33■□□□□ 0.37
SMC4-211ENST00000469858 ECSITQ9BQ95 431 aa17.33■□□□□ 0.37
SMC4-211ENST00000469858 REEP4Q9H6H4 257 aa17.33■□□□□ 0.37
SMC4-211ENST00000469858 THADAQ6YHU6 1953 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms