RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 SRRQ9GZT4 340 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 PCIF1Q9H4Z3 704 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 C11orf49Q9H6J7 331 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 OPA3Q9H6K4 179 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 WDR55Q9H6Y2 383 aaPredicted RBP4.7□□□□□ -1.66
SF3B1-207ENST00000468925 MINDY3Q9H8M7 445 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 SMURF1Q9HCE7 757 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 KMT5AQ9NQR1 393 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 SMYD2Q9NRG4 433 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 SIRT5Q9NXA8 310 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 MED11Q9P086 117 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 CCDC167Q9P0B6 97 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 SLC23A1Q9UHI7 598 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 ZDHHC2Q9UIJ5 367 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 TINAGQ9UJW2 476 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 ENTPD4Q9Y227 616 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 TMX2Q9Y320 296 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 CMAHPQ9Y471 501 aa4.7□□□□□ -1.66
SF3B1-207ENST00000468925 A0A1B0GTQ1 180 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 FAM240BA0A1B0GVZ2 78 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 RPS10-NUDT3A0A1W2PQS6 291 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 A0A1W2PQU0 124 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 MFSD2BA6NFX1 497 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 ANKDD1BA6NHY2 528 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 LRRC72A6NJI9 287 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 MEIS3P2A8K0S8 358 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 WASHC1A8K0Z3 465 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 A8MVJ9 347 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 NUDT19A8MXV4 375 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 PDHXO00330 501 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 NME4O00746 187 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 PHYHO14832 338 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 SYN3O14994 580 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 CASC3O15234 703 aaKnown RBP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 EDIL3O43854 480 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 TLR5O60602 858 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 EIF1BO60739 113 aaKnown RBP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 PGLSO95336 258 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 CLIC3O95833 236 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 CST1P01037 141 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 GCP02774 474 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 HRGP04196 525 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 GAAP10253 952 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 IFI30P13284 250 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 HPGDP15428 266 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 CD1EP15812 388 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 LBPP18428 481 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 RHCEP18577 417 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 GPX3P22352 226 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 LHCGRP22888 699 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 RPS3P23396 243 aaKnown RBP eCLIP4.69□□□□□ -1.663e-10■■□□□ 13.7
SF3B1-207ENST00000468925 STOMP27105 288 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 MAPK3P27361 379 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 RPL10P27635 214 aaKnown RBP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 TNFSF8P32971 234 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 SDC2P34741 201 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 TRHRP34981 398 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 MSX2P35548 267 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 MMP12P39900 470 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 CD79BP40259 229 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 EIF2S3P41091 472 aaKnown RBP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 EIF1P41567 113 aaKnown RBP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 MTHFRP42898 656 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 TM4SF4P48230 202 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 HSPA7P48741 367 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 PXNP49023 591 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 TGM4P49221 684 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 INPP1P49441 399 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 ACOT2P49753 483 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 GSK3BP49841 420 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 CSRP3P50461 194 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 ACLYP53396 1101 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 LIMK1P53667 647 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 NAGLUP54802 743 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 PPP3R1P63098 170 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 ERVK-8P63133 956 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 CCNA1P78396 465 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 TFAMQ00059 246 aaKnown RBP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 LIPEQ05469 1076 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 PRKG2Q13237 762 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 SLAMF1Q13291 335 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 CUL2Q13617 745 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 NFYCQ13952 458 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 CAPRIN1Q14444 709 aaKnown RBP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 SURF1Q15526 300 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 CHRNA2Q15822 529 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 KCTD19Q17RG1 926 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 MICBQ29980 383 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 FAM83EQ2M2I3 478 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 WSCD2Q2TBF2 565 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 RABL3Q5HYI8 236 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 C1orf220Q5T0J3 134 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 OTUD3Q5T2D3 398 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-207ENST00000468925 RNLSQ5VYX0 342 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 NXNL2Q5VZ03 156 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 SLC6A19Q695T7 634 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 SLFN12LQ6IEE8 588 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 SCYL2Q6P3W7 929 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 FUT10Q6P4F1 479 aa4.69□□□□□ -1.66
SF3B1-207ENST00000468925 C19orf48Q6RUI8 117 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms