RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 FZD4Q9ULV1 537 aa19.02■□□□□ 0.64
SDF4-205ENST00000465727 MAPRE3Q9UPY8 281 aa19.02■□□□□ 0.64
SDF4-205ENST00000465727 CMAHPQ9Y471 501 aa19.02■□□□□ 0.64
SDF4-205ENST00000465727 NUP214P35658 2090 aaPredicted RBP19.02■□□□□ 0.64
SDF4-205ENST00000465727 ERVH48-1M5A8F1 160 aa19.02■□□□□ 0.63
SDF4-205ENST00000465727 PDHXO00330 501 aa19.02■□□□□ 0.63
SDF4-205ENST00000465727 TFECO14948 347 aaPredicted RBP19.02■□□□□ 0.63
SDF4-205ENST00000465727 CBSLP0DN79 551 aa19.02■□□□□ 0.63
SDF4-205ENST00000465727 COX7A2P14406 83 aa19.02■□□□□ 0.63
SDF4-205ENST00000465727 MYL9P24844 172 aa19.02■□□□□ 0.63
SDF4-205ENST00000465727 GRK4P32298 578 aa19.02■□□□□ 0.63
SDF4-205ENST00000465727 CBSP35520 551 aa19.02■□□□□ 0.63
SDF4-205ENST00000465727 Q5BKY6 102 aa19.02■□□□□ 0.63
SDF4-205ENST00000465727 MACC1Q6ZN28 852 aa19.02■□□□□ 0.63
SDF4-205ENST00000465727 PLEKHH3Q7Z736 793 aa19.02■□□□□ 0.63
SDF4-205ENST00000465727 NLRP8Q86W28 1048 aa19.02■□□□□ 0.63
SDF4-205ENST00000465727 GDPD1Q8N9F7 314 aa19.02■□□□□ 0.63
SDF4-205ENST00000465727 C11orf65Q8NCR3 313 aa19.02■□□□□ 0.63
SDF4-205ENST00000465727 NIPSNAP1Q9BPW8 284 aa19.02■□□□□ 0.63
SDF4-205ENST00000465727 BOCQ9BWV1 1114 aa19.02■□□□□ 0.63
SDF4-205ENST00000465727 TTLL2Q9BWV7 592 aa19.02■□□□□ 0.63
SDF4-205ENST00000465727 ROGDIQ9GZN7 287 aa19.02■□□□□ 0.63
SDF4-205ENST00000465727 NMRK2Q9NPI5 230 aa19.02■□□□□ 0.63
SDF4-205ENST00000465727 TAS2R16Q9NYV7 291 aa19.02■□□□□ 0.63
SDF4-205ENST00000465727 SCN8AQ9UQD0 1980 aa19.02■□□□□ 0.63
SDF4-205ENST00000465727 TMEM229AB2RXF0 380 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 ZNF670-ZNF695F2Z2N8 137 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 H3BNC9 293 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 CLDN11O75508 207 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 CCNB2O95067 398 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 ITGALP20701 1170 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 PSMA1P25786 263 aaKnown RBP19.01■□□□□ 0.63
SDF4-205ENST00000465727 GJA5P36382 358 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 ZNF33BQ06732 778 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 TP53BP2Q13625 1128 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 DSC3Q14574 896 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 GLYR1Q49A26 553 aaPredicted RBP19.01■□□□□ 0.63
SDF4-205ENST00000465727 ZMAT1Q5H9K5 638 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 SLC35F1Q5T1Q4 408 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 NCEH1Q6PIU2 408 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 LAX1Q8IWV1 398 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 CADM2Q8N3J6 435 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 FYTTD1Q96QD9 318 aaKnown RBP19.01■□□□□ 0.63
SDF4-205ENST00000465727 RNF121Q9H920 327 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 THSD1Q9NS62 852 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 GIMAP4Q9NUV9 329 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 RLIMQ9NVW2 624 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 NUFIP1Q9UHK0 495 aaKnown RBP19.01■□□□□ 0.63
SDF4-205ENST00000465727 ZFP37Q9Y6Q3 630 aaPredicted RBP19.01■□□□□ 0.63
SDF4-205ENST00000465727 ALPK3Q96L96 1907 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 A0A0U1RQF3 1178 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 ARHGEF9O43307 516 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 ACSL4O60488 711 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 ICMTO60725 284 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 CPSF4O95639 269 aaKnown RBP19.01■□□□□ 0.63
SDF4-205ENST00000465727 M6PRP20645 277 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 NUDT1P36639 197 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 SPIBQ01892 262 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 NFATC2Q13469 925 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 IFI44LQ53G44 452 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 CEP78Q5JTW2 689 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 PRAMEF19Q5SWL8 479 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 C1orf52Q8N6N3 182 aaKnown RBP19.01■□□□□ 0.63
SDF4-205ENST00000465727 BTN2A2Q8WVV5 523 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 HHATLQ9HCP6 504 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 EXOSC4Q9NPD3 245 aaKnown RBP19.01■□□□□ 0.63
SDF4-205ENST00000465727 ARL15Q9NXU5 204 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 BTNL2Q9UIR0 455 aa19.01■□□□□ 0.63
SDF4-205ENST00000465727 TRBV5-4A0A0C4DH59 114 aa19■□□□□ 0.63
SDF4-205ENST00000465727 B4DXG7 233 aa19■□□□□ 0.63
SDF4-205ENST00000465727 LGI1O95970 557 aa19■□□□□ 0.63
SDF4-205ENST00000465727 IGHA2P01877 340 aa19■□□□□ 0.63
SDF4-205ENST00000465727 ITGB7P26010 798 aa19■□□□□ 0.63
SDF4-205ENST00000465727 SLC6A4P31645 630 aa19■□□□□ 0.63
SDF4-205ENST00000465727 IL12RB1P42701 662 aa19■□□□□ 0.63
SDF4-205ENST00000465727 RPIAP49247 311 aa19■□□□□ 0.63
SDF4-205ENST00000465727 KCNQ1P51787 676 aa19■□□□□ 0.63
SDF4-205ENST00000465727 FAPQ12884 760 aa19■□□□□ 0.63
SDF4-205ENST00000465727 TAF10Q12962 218 aa19■□□□□ 0.63
SDF4-205ENST00000465727 RGNQ15493 299 aa19■□□□□ 0.63
SDF4-205ENST00000465727 FAM151BQ6UXP7 276 aa19■□□□□ 0.63
SDF4-205ENST00000465727 MBOAT1Q6ZNC8 495 aa19■□□□□ 0.63
SDF4-205ENST00000465727 KIAA1143Q96AT1 154 aaPredicted RBP19■□□□□ 0.63
SDF4-205ENST00000465727 EID2BQ96D98 161 aa19■□□□□ 0.63
SDF4-205ENST00000465727 HTATIP2Q9BUP3 242 aa19■□□□□ 0.63
SDF4-205ENST00000465727 AP5M1Q9H0R1 490 aa19■□□□□ 0.63
SDF4-205ENST00000465727 MMP28Q9H239 520 aa19■□□□□ 0.63
SDF4-205ENST00000465727 ASB8Q9H765 288 aa19■□□□□ 0.63
SDF4-205ENST00000465727 NIPAL2Q9H841 368 aa19■□□□□ 0.63
SDF4-205ENST00000465727 STUB1Q9UNE7 303 aa19■□□□□ 0.63
SDF4-205ENST00000465727 PRSS21Q9Y6M0 314 aa19■□□□□ 0.63
SDF4-205ENST00000465727 ZNF106Q9H2Y7 1883 aaKnown RBP19■□□□□ 0.63
SDF4-205ENST00000465727 FZD6O60353 706 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 NBNO60934 754 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 RHOCP08134 193 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 ACRV1P26436 265 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 HTR2BP41595 481 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 CDH12P55289 794 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 GPLD1P80108 840 aa18.99■□□□□ 0.63
SDF4-205ENST00000465727 TWF1Q12792 350 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms