RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 HERC3Q15034 1050 aa13.04□□□□□ -0.32
RPP40-203ENST00000464646 MEP1AQ16819 746 aa13.04□□□□□ -0.32
RPP40-203ENST00000464646 DEFB134Q4QY38 66 aa13.04□□□□□ -0.32
RPP40-203ENST00000464646 CATSPEREQ5SY80 951 aa13.04□□□□□ -0.32
RPP40-203ENST00000464646 TEDDM1Q5T9Z0 273 aa13.04□□□□□ -0.32
RPP40-203ENST00000464646 CAPN12Q6ZSI9 719 aa13.04□□□□□ -0.32
RPP40-203ENST00000464646 KIAA0408Q6ZU52 694 aa13.04□□□□□ -0.32
RPP40-203ENST00000464646 TMPRSS11BQ86T26 416 aa13.04□□□□□ -0.32
RPP40-203ENST00000464646 IGDCC3Q8IVU1 814 aa13.04□□□□□ -0.32
RPP40-203ENST00000464646 BEST3Q8N1M1 668 aa13.04□□□□□ -0.32
RPP40-203ENST00000464646 ARHGEF39Q8N4T4 335 aa13.04□□□□□ -0.32
RPP40-203ENST00000464646 OR5T3Q8NGG3 340 aa13.04□□□□□ -0.32
RPP40-203ENST00000464646 SLC5A11Q8WWX8 675 aa13.04□□□□□ -0.32
RPP40-203ENST00000464646 IMMP1LQ96LU5 166 aa13.04□□□□□ -0.32
RPP40-203ENST00000464646 TAAR6Q96RI8 345 aa13.04□□□□□ -0.32
RPP40-203ENST00000464646 UTP23Q9BRU9 249 aaKnown RBP13.04□□□□□ -0.32
RPP40-203ENST00000464646 ZFATQ9P243 1243 aa13.04□□□□□ -0.32
RPP40-203ENST00000464646 USP9XQ93008 2570 aaPredicted RBP13.04□□□□□ -0.32
RPP40-203ENST00000464646 CPAMD8Q8IZJ3 1885 aa13.04□□□□□ -0.32
RPP40-203ENST00000464646 A8MUA0 341 aa13.03□□□□□ -0.32
RPP40-203ENST00000464646 CCL21O00585 134 aa13.03□□□□□ -0.32
RPP40-203ENST00000464646 ZNF888P0CJ79 500 aaPredicted RBP13.03□□□□□ -0.32
RPP40-203ENST00000464646 ESRRAP11474 423 aaPredicted RBP13.03□□□□□ -0.32
RPP40-203ENST00000464646 EFNA3P52797 238 aa13.03□□□□□ -0.32
RPP40-203ENST00000464646 ITGA8P53708 1063 aa13.03□□□□□ -0.32
RPP40-203ENST00000464646 SLC12A2P55011 1212 aa13.03□□□□□ -0.32
RPP40-203ENST00000464646 AP1S2P56377 157 aa13.03□□□□□ -0.32
RPP40-203ENST00000464646 TIAL1Q01085 375 aaKnown RBP eCLIP13.03□□□□□ -0.32
RPP40-203ENST00000464646 DR1Q01658 176 aa13.03□□□□□ -0.32
RPP40-203ENST00000464646 MORF4L2Q15014 288 aa13.03□□□□□ -0.32
RPP40-203ENST00000464646 ZRSR2Q15696 482 aaKnown RBP13.03□□□□□ -0.32
RPP40-203ENST00000464646 INAQ16352 499 aa13.03□□□□□ -0.32
RPP40-203ENST00000464646 EXT1Q16394 746 aa13.03□□□□□ -0.32
RPP40-203ENST00000464646 ACER2Q5QJU3 275 aa13.03□□□□□ -0.32
RPP40-203ENST00000464646 PLAG1Q6DJT9 500 aa13.03□□□□□ -0.32
RPP40-203ENST00000464646 TRMT10BQ6PF06 316 aaKnown RBP13.03□□□□□ -0.32
RPP40-203ENST00000464646 ABHD13Q7L211 337 aa13.03□□□□□ -0.32
RPP40-203ENST00000464646 SRRM1Q8IYB3 904 aaKnown RBP13.03□□□□□ -0.32
RPP40-203ENST00000464646 TSLPQ969D9 159 aa13.03□□□□□ -0.32
RPP40-203ENST00000464646 MOCOSQ96EN8 888 aa13.03□□□□□ -0.32
RPP40-203ENST00000464646 PTCHD1Q96NR3 888 aa13.03□□□□□ -0.32
RPP40-203ENST00000464646 OLFM1Q99784 485 aa13.03□□□□□ -0.32
RPP40-203ENST00000464646 SLX1AQ9BQ83 275 aa13.03□□□□□ -0.32
RPP40-203ENST00000464646 TRIM51Q9BSJ1 452 aa13.03□□□□□ -0.32
RPP40-203ENST00000464646 SGPP1Q9BX95 441 aa13.03□□□□□ -0.32
RPP40-203ENST00000464646 FAM129AQ9BZQ8 928 aa13.03□□□□□ -0.32
RPP40-203ENST00000464646 CDCP1Q9H5V8 836 aa13.03□□□□□ -0.32
RPP40-203ENST00000464646 COPG2Q9UBF2 871 aa13.03□□□□□ -0.32
RPP40-203ENST00000464646 MAST4O15021 2626 aa13.03□□□□□ -0.32
RPP40-203ENST00000464646 TRBC2A0A5B9 178 aa13.02□□□□□ -0.33
RPP40-203ENST00000464646 NPEPPSL1A6NEC2 478 aa13.02□□□□□ -0.33
RPP40-203ENST00000464646 URADA6NGE7 173 aa13.02□□□□□ -0.33
RPP40-203ENST00000464646 CES2O00748 559 aa13.02□□□□□ -0.33
RPP40-203ENST00000464646 NDC80O14777 642 aa13.02□□□□□ -0.33
RPP40-203ENST00000464646 CHST10O43529 356 aa13.02□□□□□ -0.33
RPP40-203ENST00000464646 FHP07954 510 aa13.02□□□□□ -0.33
RPP40-203ENST00000464646 CD46P15529 392 aa13.02□□□□□ -0.33
RPP40-203ENST00000464646 ALOX12P18054 663 aa13.02□□□□□ -0.33
RPP40-203ENST00000464646 JAK1P23458 1154 aa13.02□□□□□ -0.33
RPP40-203ENST00000464646 EEF1DP29692 281 aaKnown RBP13.02□□□□□ -0.33
RPP40-203ENST00000464646 PAFAH1B1P43034 410 aa13.02□□□□□ -0.33
RPP40-203ENST00000464646 RAB8AP61006 207 aa13.02□□□□□ -0.33
RPP40-203ENST00000464646 GNG11P61952 73 aa13.02□□□□□ -0.33
RPP40-203ENST00000464646 PDIA2Q13087 525 aaKnown RBP13.02□□□□□ -0.33
RPP40-203ENST00000464646 ZNF460Q14592 562 aa13.02□□□□□ -0.33
RPP40-203ENST00000464646 SP5Q6BEB4 398 aaPredicted RBP13.02□□□□□ -0.33
RPP40-203ENST00000464646 STRA8Q7Z7C7 330 aa13.02□□□□□ -0.33
RPP40-203ENST00000464646 PDSS2Q86YH6 399 aa13.02□□□□□ -0.33
RPP40-203ENST00000464646 CRLF3Q8IUI8 442 aa13.02□□□□□ -0.33
RPP40-203ENST00000464646 CNTN4Q8IWV2 1026 aa13.02□□□□□ -0.33
RPP40-203ENST00000464646 SLC5A8Q8N695 610 aa13.02□□□□□ -0.33
RPP40-203ENST00000464646 FAM98AQ8NCA5 519 aaKnown RBP13.02□□□□□ -0.33
RPP40-203ENST00000464646 ZNF740Q8NDX6 193 aa13.02□□□□□ -0.33
RPP40-203ENST00000464646 OR56A3Q8NH54 315 aa13.02□□□□□ -0.33
RPP40-203ENST00000464646 DNAJB8Q8NHS0 232 aa13.02□□□□□ -0.33
RPP40-203ENST00000464646 ANP32BQ92688 251 aaKnown RBP13.02□□□□□ -0.33
RPP40-203ENST00000464646 NEIL2Q969S2 332 aa13.02□□□□□ -0.33
RPP40-203ENST00000464646 TBC1D20Q96BZ9 403 aa13.02□□□□□ -0.33
RPP40-203ENST00000464646 FBXL8Q96CD0 374 aa13.02□□□□□ -0.33
RPP40-203ENST00000464646 TM4SF19Q96DZ7 209 aa13.02□□□□□ -0.33
RPP40-203ENST00000464646 RUNDC3BQ96NL0 473 aa13.02□□□□□ -0.33
RPP40-203ENST00000464646 AIF1LQ9BQI0 150 aa13.02□□□□□ -0.33
RPP40-203ENST00000464646 TSPAN10Q9H1Z9 355 aaPredicted RBP13.02□□□□□ -0.33
RPP40-203ENST00000464646 SLC22A7Q9Y694 548 aa13.02□□□□□ -0.33
RPP40-203ENST00000464646 FAM95CA0A1B0GW59 222 aa13.01□□□□□ -0.33
RPP40-203ENST00000464646 A0A1W2PQ72 361 aa13.01□□□□□ -0.33
RPP40-203ENST00000464646 NCF1BA6NI72 391 aaPredicted RBP13.01□□□□□ -0.33
RPP40-203ENST00000464646 GABRR3A8MPY1 467 aa13.01□□□□□ -0.33
RPP40-203ENST00000464646 NCF1CA8MVU1 366 aaPredicted RBP13.01□□□□□ -0.33
RPP40-203ENST00000464646 EFCAB8A8MWE9 144 aa13.01□□□□□ -0.33
RPP40-203ENST00000464646 H2AFYO75367 372 aaKnown RBP13.01□□□□□ -0.33
RPP40-203ENST00000464646 MLYCDO95822 493 aa13.01□□□□□ -0.33
RPP40-203ENST00000464646 STSP08842 583 aa13.01□□□□□ -0.33
RPP40-203ENST00000464646 ENO2P09104 434 aaPredicted RBP13.01□□□□□ -0.33
RPP40-203ENST00000464646 NCF1P14598 390 aaPredicted RBP13.01□□□□□ -0.33
RPP40-203ENST00000464646 MST1P26927 711 aa13.01□□□□□ -0.33
RPP40-203ENST00000464646 ALDH6A1Q02252 535 aaKnown RBP13.01□□□□□ -0.33
RPP40-203ENST00000464646 OR1C1Q15619 314 aa13.01□□□□□ -0.33
RPP40-203ENST00000464646 MAPKAPK3Q16644 382 aa13.01□□□□□ -0.33
RPP40-203ENST00000464646 TOR1AIP1Q5JTV8 583 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms