RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 IRF9Q00978 393 aa12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 NAA30Q147X3 362 aaPredicted RBP12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 LACTB2Q53H82 288 aaPredicted RBP12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 TECRLQ5HYJ1 363 aa12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 TMIGD1Q6UXZ0 262 aa12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 ZNF843Q8N446 348 aa12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 CRB3Q9BUF7 120 aa12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 P4HTMQ9NXG6 502 aa12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 PSMC3IPQ9P2W1 217 aaPredicted RBP12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 OPTCQ9UBM4 332 aa12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 ZFHX4Q86UP3 3567 aa12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 ARGFXA6NJG6 315 aa12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 UBXN8O00124 270 aa12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 MAP2K7O14733 419 aa12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 CLEC3AO75596 197 aa12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 C1QL1O75973 258 aa12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 SLU7O95391 586 aaKnown RBP12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 STXBP1P61764 594 aaKnown RBP12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 MEF2AQ02078 507 aaPredicted RBP12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 SLBPQ14493 270 aaKnown RBP eCLIP12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 SLC29A2Q14542 456 aa12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 RASA2Q15283 850 aa12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 PCBP2Q15366 365 aaKnown RBP eCLIP12.39□□□□□ -0.432e-10■■■■□ 26
R3HDM1-213ENST00000463230 RBBP7Q16576 425 aa12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 HIST2H2ACQ16777 129 aaPredicted RBP12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 C18orf21Q32NC0 220 aaPredicted RBP12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 HIST2H2AA3Q6FI13 130 aa12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 METTL27Q8N6F8 245 aaPredicted RBP12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 EXT2Q93063 718 aa12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 SPNS1Q9H2V7 528 aa12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 RRAGDQ9NQL2 400 aaPredicted RBP12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 MGAQ8IWI9 3026 aa12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 CCDC88CQ9P219 2028 aa12.39□□□□□ -0.43
R3HDM1-213ENST00000463230 SOCS6O14544 535 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 CCNT2O60583 730 aaKnown RBP12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 KLHL18O94889 574 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 ALOX12P18054 663 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 KLC1Q07866 573 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 RBBP5Q15291 538 aaKnown RBP12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 DCAF10Q5QP82 559 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 ZC3H7AQ8IWR0 971 aaKnown RBP12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 ANKRD53Q8N9V6 530 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 CLEC1AQ8NC01 280 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 ZNF740Q8NDX6 193 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 UHMK1Q8TAS1 419 aaKnown RBP12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 CREB3L4Q8TEY5 395 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 OR1F2PQ96R84 312 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 MRPL57Q9BQC6 102 aaKnown RBP12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 SEMA4CQ9C0C4 833 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 RHBGQ9H310 441 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 EPB41L4BQ9H329 900 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 ANKZF1Q9H8Y5 726 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 MLXIPLQ9NP71 852 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 ADGRE2Q9UHX3 823 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 C3orf18Q9UK00 162 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 MRPS2Q9Y399 296 aaKnown RBP12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 TSC22D4Q9Y3Q8 395 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 CFAP47Q6ZTR5 3102 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 STX16-NPEPL1H3BU86 382 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 STX16O14662 325 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 UGDHO60701 494 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 GALR3O60755 368 aaPredicted RBP12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 SMIM10L1P0DMW3 83 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 GFAPP14136 432 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 EPB42P16452 691 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 VARSP26640 1264 aaKnown RBP12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 GCAP28676 217 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 EMP2P54851 167 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 AIMP2Q13155 320 aaKnown RBP12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 TUBB8Q3ZCM7 444 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 XKR6Q5GH73 641 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 TDRPQ86YL5 185 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 KCT2Q8NC54 265 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 OR9A4Q8NGU2 314 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 GAL3ST3Q96A11 431 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 ABHD17AQ96GS6 310 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 SMIM10Q96HG1 83 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 SOX17Q9H6I2 414 aaPredicted RBP12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 ATP13A2Q9NQ11 1180 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 C5AR2Q9P296 337 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 ZNF451Q9Y4E5 1061 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 HS3ST3B1Q9Y662 390 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 CELSR3Q9NYQ7 3312 aa12.38□□□□□ -0.43
R3HDM1-213ENST00000463230 A0A088AWK7 358 aa12.37□□□□□ -0.43
R3HDM1-213ENST00000463230 B8ZZF3 427 aa12.37□□□□□ -0.43
R3HDM1-213ENST00000463230 SMIM24O75264 130 aa12.37□□□□□ -0.43
R3HDM1-213ENST00000463230 HPP00738 406 aa12.37□□□□□ -0.43
R3HDM1-213ENST00000463230 GSTA1P08263 222 aa12.37□□□□□ -0.43
R3HDM1-213ENST00000463230 ZNF10P21506 573 aaPredicted RBP12.37□□□□□ -0.43
R3HDM1-213ENST00000463230 GMPRP36959 345 aa12.37□□□□□ -0.43
R3HDM1-213ENST00000463230 PGDP52209 483 aa12.37□□□□□ -0.43
R3HDM1-213ENST00000463230 AP2B1P63010 937 aa12.37□□□□□ -0.43
R3HDM1-213ENST00000463230 IRF8Q02556 426 aa12.37□□□□□ -0.43
R3HDM1-213ENST00000463230 DOC2AQ14183 400 aa12.37□□□□□ -0.43
R3HDM1-213ENST00000463230 FAM69BQ5VUD6 431 aa12.37□□□□□ -0.43
R3HDM1-213ENST00000463230 CPZQ66K79 652 aa12.37□□□□□ -0.43
R3HDM1-213ENST00000463230 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.37□□□□□ -0.439e-7■■■■■ 51.2
R3HDM1-213ENST00000463230 DTWD1Q8N5C7 304 aa12.37□□□□□ -0.43
R3HDM1-213ENST00000463230 ZCCHC10Q8TBK6 192 aa12.37□□□□□ -0.43
R3HDM1-213ENST00000463230 SLC25A23Q9BV35 468 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms