RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 MEN1O00255 615 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 NCAM2O15394 837 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 PGLSO95336 258 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 PAPSS2O95340 614 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 AHSGP02765 367 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 APODP05090 189 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 CBLP22681 906 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 CDH4P55283 916 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 KCNK10P57789 538 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 NFKB2Q00653 900 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 ELP6Q0PNE2 266 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 SLAMF1Q13291 335 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 LRRC32Q14392 662 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 UBXN2BQ14CS0 331 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 PON2Q15165 354 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 SETMARQ53H47 684 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 C12orf40Q86WS4 652 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 YIPF7Q8N8F6 280 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 GDPD1Q8N9F7 314 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 ZNF540Q8NDQ6 660 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 ASB15Q8WXK1 588 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 UFD1Q92890 307 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 IGSF8Q969P0 613 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 KIAA1143Q96AT1 154 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 CHFRQ96EP1 664 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 CRELD1Q96HD1 420 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 AGAP2Q99490 1192 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 AKTIPQ9H8T0 292 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 LTB4R2Q9NPC1 389 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 PHF11Q9UIL8 331 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 FBXO10Q9UK96 956 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 PNMA8BQ9ULN7 279 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 NDRG2Q9UN36 371 aaKnown RBP11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 KLHL20Q9Y2M5 609 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 SNX10Q9Y5X0 201 aa11.09□□□□□ -0.63
TRAPPC3-205ENST00000462715 F5P12259 2224 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 LINC00854A0A1B0GVQ3 168 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 PSMD3O43242 534 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 XPNPEP2O43895 674 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 FZD6O60353 706 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 VPS26AO75436 327 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 MAGP20916 626 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 SLC6A11P48066 632 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 POU4F1Q01851 419 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 ZNF177Q13360 481 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 MAB21L1Q13394 359 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 FAM83EQ2M2I3 478 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 PROX2Q3B8N5 592 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 TECRLQ5HYJ1 363 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 TMEM196Q5HYL7 178 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 MANEALQ5VSG8 457 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 PHYKPLQ8IUZ5 450 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 ZNF683Q8IZ20 524 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 OR8H2Q8N162 312 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 MYEOVQ96EZ4 313 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 NEDD4LQ96PU5 975 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 SMURF2Q9HAU4 748 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 GMEB2Q9UKD1 530 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 SLC27A6Q9Y2P4 619 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 PCDHB14Q9Y5E9 798 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 A8MV72 311 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 I3L521 148 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 FGF10O15520 208 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 SEC22BO75396 215 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 RFPL3O75679 317 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 KAT7O95251 611 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 CST1P01037 141 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 GBX2P52951 348 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 TPI1P60174 286 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 DGCR6Q14129 220 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 CAPRIN1Q14444 709 aaKnown RBP11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 COL28A1Q2UY09 1125 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 DGKKQ5KSL6 1271 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 SLC35F1Q5T1Q4 408 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 KDM4DQ6B0I6 523 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 TYW3Q6IPR3 259 aaKnown RBP11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 CYHR1Q6ZMK1 362 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 PYROXD2Q8N2H3 581 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 VANGL1Q8TAA9 524 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 FIBINQ8TAL6 211 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 WFIKKN2Q8TEU8 576 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 MYDGFQ969H8 173 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 MIR1-1HGQ9H1L0 117 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 CATSPERBQ9H7T0 1116 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 IL1RL2Q9HB29 575 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 GPATCH2LQ9NWQ4 482 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 TMEFF2Q9UIK5 374 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 MYOFQ9NZM1 2061 aa11.08□□□□□ -0.64
TRAPPC3-205ENST00000462715 KIAA1549LQ6ZVL6 1849 aa11.07□□□□□ -0.64
TRAPPC3-205ENST00000462715 TBC1D3BA6NDS4 549 aa11.07□□□□□ -0.64
TRAPPC3-205ENST00000462715 B4DXG7 233 aa11.07□□□□□ -0.64
TRAPPC3-205ENST00000462715 FAM72CH0Y354 149 aa11.07□□□□□ -0.64
TRAPPC3-205ENST00000462715 SSX4O60224 188 aa11.07□□□□□ -0.64
TRAPPC3-205ENST00000462715 HS6ST1O60243 411 aa11.07□□□□□ -0.64
TRAPPC3-205ENST00000462715 FAM20BO75063 409 aa11.07□□□□□ -0.64
TRAPPC3-205ENST00000462715 ADAM11O75078 769 aa11.07□□□□□ -0.64
TRAPPC3-205ENST00000462715 CYP7B1O75881 506 aa11.07□□□□□ -0.64
TRAPPC3-205ENST00000462715 FADS2O95864 444 aaKnown RBP11.07□□□□□ -0.64
TRAPPC3-205ENST00000462715 NCF1P14598 390 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms