RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 A0A1W2PP18 115 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 BLACEA4D250 179 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 TMX2-CTNND1H3BSU7 103 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 BTN3A3O00478 584 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 CLDN4O14493 209 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 ZNF195O14628 629 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 TOX3O15405 576 aaPredicted RBP5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 FLRT2O43155 660 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 ERI3O43414 337 aaKnown RBP5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 TNFSF14O43557 240 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 DYRK3O43781 588 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 PCDHGA12O60330 932 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 SH3BGRLO75368 114 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 CBX6O95503 412 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 LDOC1O95751 146 aaPredicted RBP5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 LMNAP02545 664 aaKnown RBP5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 KLK1P06870 262 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 PIM1P11309 404 aaPredicted RBP5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 G6PDP11413 515 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 DRD2P14416 443 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 MAGP20916 626 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 PSMB5P28074 263 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 EPHA8P29322 1005 aaPredicted RBP5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 PPP2R1BP30154 601 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 NTSP30990 170 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 TIA1P31483 386 aaKnown RBP eCLIP5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 ARRB2P32121 409 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 MPIP34949 423 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 GRIA3P42263 894 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 GRK6P43250 576 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 KIR3DL1P43629 444 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 CAPZBP47756 277 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 PLA2G16P53816 162 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 ARSFP54793 590 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 MTTPP55157 894 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 MAZP56270 477 aaKnown RBP5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 CLDN8P56748 225 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 UBE2IP63279 158 aaKnown RBP5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 CSNK1G2P78368 415 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 HSD11B2P80365 405 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 REEP5Q00765 189 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 CYP4F3Q08477 520 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 TBL3Q12788 808 aaKnown RBP5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 BNIP3Q12983 259 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 SRSF5Q13243 272 aaKnown RBP5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 SLC14A1Q13336 389 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 TP53BP2Q13625 1128 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 GRB7Q14451 532 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 LPAL2Q16609 132 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 CLPPQ16740 277 aaPredicted RBP5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 ZNF423Q2M1K9 1284 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 SPATS1Q496A3 300 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 RFTN2Q52LD8 501 aaPredicted RBP5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 XKR7Q5GH72 579 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 COQ5Q5HYK3 327 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 TOR1AIP1Q5JTV8 583 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 SNAP47Q5SQN1 464 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 TPRG1LQ5T0D9 272 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 CES4AQ5XG92 561 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 BLOC1S3Q6QNY0 202 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 WDR74Q6RFH5 385 aaPredicted RBP5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 ANGPTL8Q6UXH0 198 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 BNC2Q6ZN30 1099 aaPredicted RBP5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 Q6ZSR9 355 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 SCUBE1Q8IWY4 988 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 DEFB107AQ8IZN7 70 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 EID2Q8N6I1 236 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 POU5F2Q8N7G0 328 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 Q8N9G6 341 aaPredicted RBP5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 ZBTB44Q8NCP5 570 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 OR2L5Q8NG80 312 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 OR4K1Q8NGD4 311 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 C1orf216Q8TAB5 229 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 WDR20Q8TBZ3 569 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 RHBDD1Q8TEB9 315 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 CHTF18Q8WVB6 975 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 ATOH1Q92858 354 aaPredicted RBP5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 GAL3ST3Q96A11 431 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 C3orf30Q96M34 536 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 TGM7Q96PF1 710 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 TSSK3Q96PN8 268 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 OR2A14Q96R47 310 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 PANX1Q96RD7 426 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 GFM1Q96RP9 751 aaKnown RBP5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 NDC1Q9BTX1 674 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 THTPAQ9BU02 230 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 EFHD1Q9BUP0 239 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 THUMPD3Q9BV44 507 aaKnown RBP5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 YIPF2Q9BWQ6 316 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 BRINP2Q9C0B6 783 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 RAB33BQ9H082 229 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 OR51B5Q9H339 312 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 SPAG4Q9NPE6 437 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 ARL8BQ9NVJ2 186 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 FAM120CQ9NX05 1096 aaKnown RBP5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 FTSJ1Q9UET6 329 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 KLHL3Q9UH77 587 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 KLF15Q9UIH9 416 aa5.59□□□□□ -1.51
RNU1-88P-201ENST00000459274 PRPF19Q9UMS4 504 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms