RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 VPS4BO75351 444 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 CFIP05156 583 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 ANXA6P08133 673 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 HOXB9P17482 250 aaPredicted RBP8.34□□□□□ -1.07
RIF1-208ENST00000457745 CCND1P24385 295 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 PTPN4P29074 926 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 TIA1P31483 386 aaKnown RBP eCLIP8.34□□□□□ -1.07
RIF1-208ENST00000457745 BSGP35613 385 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 CDKN2CP42773 168 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 GABRA4P48169 554 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 ERFP50548 548 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 NUDT2P50583 147 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 HNRNPKP61978 463 aaKnown RBP eCLIP8.34□□□□□ -1.07
RIF1-208ENST00000457745 SIM2Q14190 667 aaPredicted RBP8.34□□□□□ -1.07
RIF1-208ENST00000457745 RCAN2Q14206 197 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 CAPRIN1Q14444 709 aaKnown RBP8.34□□□□□ -1.07
RIF1-208ENST00000457745 ELOCQ15369 112 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 HKDC1Q2TB90 917 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 FAM180BQ6P0A1 224 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 GUSBP11Q6P575 273 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 FIGLAQ6QHK4 219 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 SPESP1Q6UW49 350 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 PRSS41Q7RTY9 318 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 SLC9B2Q86UD5 537 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 GKN2Q86XP6 184 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 SYT12Q8IV01 421 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 METTL4Q8N3J2 472 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 AVL9Q8NBF6 648 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 MFSD9Q8NBP5 474 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 KCT2Q8NC54 265 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 OR7A2PQ8NGA2 310 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 WDR60Q8WVS4 1066 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 KLHL29Q96CT2 875 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 OR2A5Q96R48 311 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 MAP3K3Q99759 626 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 INPP5KQ9BT40 448 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 RAB11FIP5Q9BXF6 653 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 TRIM4Q9C037 500 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 NT5DC2Q9H857 520 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 ERVMER34-1Q9H9K5 563 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 IL1RL2Q9HB29 575 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 TXLNGQ9NUQ3 528 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 TMEM184CQ9NVA4 438 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 HRASLS2Q9NWW9 162 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 NOP53Q9NZM5 478 aaKnown RBP8.34□□□□□ -1.07
RIF1-208ENST00000457745 VPS29Q9UBQ0 182 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 TSC22D4Q9Y3Q8 395 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 PCDHGA7Q9Y5G6 932 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 PCDHGA11Q9Y5H2 935 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 SCN2AQ99250 2005 aa8.34□□□□□ -1.07
RIF1-208ENST00000457745 DNAH14Q0VDD8 3507 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 FER1L5A0AVI2 2057 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 LILRA5A6NI73 299 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 SLC9B1P1A6NJY1 282 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 FOXE1O00358 373 aaPredicted RBP8.33□□□□□ -1.08
RIF1-208ENST00000457745 MRASO14807 208 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 SIGLEC6O43699 453 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 SCN2BO60939 215 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 SLC22A3O75751 556 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 PROS1P07225 676 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 SNRPB2P08579 225 aaKnown RBP8.33□□□□□ -1.08
RIF1-208ENST00000457745 LAMP1P11279 417 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 PIM1P11309 404 aaPredicted RBP8.33□□□□□ -1.08
RIF1-208ENST00000457745 IDO1P14902 403 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 PTPN6P29350 595 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 CMPK1P30085 196 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 PTGER1P34995 402 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 MSX2P35548 267 aaPredicted RBP8.33□□□□□ -1.08
RIF1-208ENST00000457745 PIK3CBP42338 1070 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 ACADVLP49748 655 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 POLR2JP52435 117 aaKnown RBP8.33□□□□□ -1.08
RIF1-208ENST00000457745 DUSP2Q05923 314 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 CEACAM7Q14002 265 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 CYLC2Q14093 348 aaPredicted RBP8.33□□□□□ -1.08
RIF1-208ENST00000457745 KIR2DS3Q14952 304 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 GSTA3Q16772 222 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 TRIM61Q5EBN2 209 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 TOR1AIP1Q5JTV8 583 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 DEPDC1Q5TB30 811 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 KHDRBS2Q5VWX1 349 aaKnown RBP8.33□□□□□ -1.08
RIF1-208ENST00000457745 DNAJC14Q6Y2X3 702 aaPredicted RBP8.33□□□□□ -1.08
RIF1-208ENST00000457745 FAM92BQ6ZTR7 304 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 ZNF551Q7Z340 670 aaPredicted RBP8.33□□□□□ -1.08
RIF1-208ENST00000457745 ANKRD46Q86W74 232 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 TMEM151BQ8IW70 566 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 DEFB107AQ8IZN7 70 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 DSELQ8IZU8 1212 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 KIRREL3Q8IZU9 778 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 CLEC4FQ8N1N0 589 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 ARHGEF39Q8N4T4 335 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 Q8N9G6 341 aaPredicted RBP8.33□□□□□ -1.08
RIF1-208ENST00000457745 FAM156AQ8NDB6 213 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 FAM13CQ8NE31 585 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 CDC26Q8NHZ8 85 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 RP9Q8TA86 221 aaKnown RBP8.33□□□□□ -1.08
RIF1-208ENST00000457745 BAHD1Q8TBE0 780 aaPredicted RBP8.33□□□□□ -1.08
RIF1-208ENST00000457745 KLHL6Q8WZ60 621 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 CCDC74AQ96AQ1 378 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 MIEF2Q96C03 454 aa8.33□□□□□ -1.08
RIF1-208ENST00000457745 SPDL1Q96EA4 605 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms