RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 ZFP69BQ9UJL9 534 aa9.59□□□□□ -0.87
RFX3-210ENST00000457373 CDC14AQ9UNH5 594 aa9.59□□□□□ -0.87
RFX3-210ENST00000457373 PTRH2Q9Y3E5 179 aaKnown RBP9.59□□□□□ -0.87
RFX3-210ENST00000457373 CHD8Q9HCK8 2581 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 CCDC189A1A4V9 331 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 PRPF4O43172 522 aaKnown RBP eCLIP9.58□□□□□ -0.88
RFX3-210ENST00000457373 NDUFS4O43181 175 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 FOXS1O43638 330 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 KLK8O60259 260 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 PRAMEF4O60810 478 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 SIX3O95343 332 aaPredicted RBP9.58□□□□□ -0.88
RFX3-210ENST00000457373 CD63P08962 238 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 EPB42P16452 691 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 IL1RNP18510 177 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 FBLP22087 321 aaKnown RBP9.58□□□□□ -0.88
RFX3-210ENST00000457373 OTX2P32243 289 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 HNF4AP41235 474 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 AVPR1BP47901 424 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 ALDH18A1P54886 795 aaKnown RBP9.58□□□□□ -0.88
RFX3-210ENST00000457373 MAT1AQ00266 395 aaKnown RBP9.58□□□□□ -0.88
RFX3-210ENST00000457373 IRF8Q02556 426 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 OCA2Q04671 838 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 IL10RAQ13651 578 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 DOC2AQ14183 400 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 TBR1Q16650 682 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 HIST2H2ACQ16777 129 aaPredicted RBP9.58□□□□□ -0.88
RFX3-210ENST00000457373 SYT16Q17RD7 645 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 PRAMEF9Q5VWM5 478 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 HIST2H2AA3Q6FI13 130 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 SHISA6Q6ZSJ9 500 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 TDRPQ86YL5 185 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 PRSS58Q8IYP2 241 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 KRT78Q8N1N4 520 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 PTGR2Q8N8N7 351 aaPredicted RBP9.58□□□□□ -0.88
RFX3-210ENST00000457373 ANKRD53Q8N9V6 530 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 OR9A4Q8NGU2 314 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 UBTD2Q8WUN7 234 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 CAVIN3Q969G5 261 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 CATSPER2Q96P56 530 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 MRPL57Q9BQC6 102 aaKnown RBP9.58□□□□□ -0.88
RFX3-210ENST00000457373 SARGQ9BW04 601 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 DRC3Q9H069 523 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 MRPL46Q9H2W6 279 aaKnown RBP9.58□□□□□ -0.88
RFX3-210ENST00000457373 SOX17Q9H6I2 414 aaPredicted RBP9.58□□□□□ -0.88
RFX3-210ENST00000457373 PPCSQ9HAB8 311 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 ANKHQ9HCJ1 492 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 GEMIN8Q9NWZ8 242 aaKnown RBP9.58□□□□□ -0.88
RFX3-210ENST00000457373 RAB21Q9UL25 225 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 PADI2Q9Y2J8 665 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 SEC16AO15027 2179 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 SCN2AQ99250 2005 aa9.58□□□□□ -0.88
RFX3-210ENST00000457373 WDFY3Q8IZQ1 3526 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 ANKDD1BA6NHY2 528 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 SGK494L7N484 410 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 CDH16O75309 829 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 KLF7O75840 302 aaPredicted RBP9.57□□□□□ -0.88
RFX3-210ENST00000457373 ONECUT2O95948 504 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 B3GALT4O96024 378 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 IL2RAP01589 272 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 ALBP02768 609 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 SBK3P0C264 359 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 EPORP19235 508 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 TAC1P20366 129 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 EEF1DP29692 281 aaKnown RBP9.57□□□□□ -0.88
RFX3-210ENST00000457373 AHRP35869 848 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 RGS1Q08116 209 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 LAPTM5Q13571 262 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 GTF2H2Q13888 395 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 FAM53BQ14153 422 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 SSPNQ14714 243 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 PCBP2Q15366 365 aaKnown RBP eCLIP9.57□□□□□ -0.882e-6■■■□□ 16
RFX3-210ENST00000457373 NKG7Q16617 165 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 UGT8Q16880 541 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 LINC00303Q3SY05 128 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 VWA2Q5GFL6 755 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 TOR1AIP1Q5JTV8 583 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 TMEM214Q6NUQ4 689 aaKnown RBP9.57□□□□□ -0.88
RFX3-210ENST00000457373 GTF2H2CQ6P1K8 395 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 TMIGD1Q6UXZ0 262 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 PRSS41Q7RTY9 318 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.57□□□□□ -0.88
RFX3-210ENST00000457373 CCDC116Q8IYX3 515 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 ARHGEF39Q8N4T4 335 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 TRPV3Q8NET8 790 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 NT5CQ8TCD5 201 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 STT3BQ8TCJ2 826 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 ACMSDQ8TDX5 336 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 TTC9Q92623 222 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 ATP6V1E2Q96A05 226 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 FKBP10Q96AY3 582 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 MIEF2Q96C03 454 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 MVB12AQ96EY5 273 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 PTCD3Q96EY7 689 aaKnown RBP9.57□□□□□ -0.88
RFX3-210ENST00000457373 EFCAB11Q9BUY7 163 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 KLHL31Q9H511 634 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 NT5DC2Q9H857 520 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 TRPC4Q9UBN4 977 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 CTSFQ9UBX1 484 aa9.57□□□□□ -0.88
RFX3-210ENST00000457373 ZNF282Q9UDV7 671 aaPredicted RBP9.57□□□□□ -0.88
RFX3-210ENST00000457373 DCDC2Q9UHG0 476 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms