RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 GALNT16Q8N428 558 aa17.14■□□□□ 0.33
PDLIM2-215ENST00000456545 ARHGEF39Q8N4T4 335 aa17.14■□□□□ 0.33
PDLIM2-215ENST00000456545 AMER3Q8N944 861 aa17.14■□□□□ 0.33
PDLIM2-215ENST00000456545 FDCSPQ8NFU4 85 aa17.14■□□□□ 0.33
PDLIM2-215ENST00000456545 TTLQ8NG68 377 aa17.14■□□□□ 0.33
PDLIM2-215ENST00000456545 OR51Q1Q8NH59 317 aa17.14■□□□□ 0.33
PDLIM2-215ENST00000456545 METTL21AQ8WXB1 218 aa17.14■□□□□ 0.33
PDLIM2-215ENST00000456545 MOCOSQ96EN8 888 aa17.14■□□□□ 0.33
PDLIM2-215ENST00000456545 SCYL1Q96KG9 808 aa17.14■□□□□ 0.33
PDLIM2-215ENST00000456545 TMEM79Q9BSE2 394 aa17.14■□□□□ 0.33
PDLIM2-215ENST00000456545 CD244Q9BZW8 370 aa17.14■□□□□ 0.33
PDLIM2-215ENST00000456545 SPNS1Q9H2V7 528 aa17.14■□□□□ 0.33
PDLIM2-215ENST00000456545 HCN3Q9P1Z3 774 aa17.14■□□□□ 0.33
PDLIM2-215ENST00000456545 ANAPC2Q9UJX6 822 aa17.14■□□□□ 0.33
PDLIM2-215ENST00000456545 MKL2Q9ULH7 1088 aa17.14■□□□□ 0.33
PDLIM2-215ENST00000456545 NAALAD2Q9Y3Q0 740 aa17.14■□□□□ 0.33
PDLIM2-215ENST00000456545 HS3ST3B1Q9Y662 390 aa17.14■□□□□ 0.33
PDLIM2-215ENST00000456545 SCN3AQ9NY46 2000 aa17.14■□□□□ 0.33
PDLIM2-215ENST00000456545 HMX2A2RU54 273 aa17.13■□□□□ 0.33
PDLIM2-215ENST00000456545 IDSB3KWA1 339 aa17.13■□□□□ 0.33
PDLIM2-215ENST00000456545 K7EM74 188 aa17.13■□□□□ 0.33
PDLIM2-215ENST00000456545 SOCS6O14544 535 aa17.13■□□□□ 0.33
PDLIM2-215ENST00000456545 KLHL18O94889 574 aa17.13■□□□□ 0.33
PDLIM2-215ENST00000456545 ALPPP05187 535 aa17.13■□□□□ 0.33
PDLIM2-215ENST00000456545 ACPPP15309 386 aa17.13■□□□□ 0.33
PDLIM2-215ENST00000456545 ALOX12P18054 663 aa17.13■□□□□ 0.33
PDLIM2-215ENST00000456545 ITGA3P26006 1051 aa17.13■□□□□ 0.33
PDLIM2-215ENST00000456545 IRF8Q02556 426 aa17.13■□□□□ 0.33
PDLIM2-215ENST00000456545 LAPTM5Q13571 262 aa17.13■□□□□ 0.33
PDLIM2-215ENST00000456545 SLBPQ14493 270 aaKnown RBP eCLIP17.13■□□□□ 0.33
PDLIM2-215ENST00000456545 MINDY4Q4G0A6 757 aa17.13■□□□□ 0.33
PDLIM2-215ENST00000456545 KIRREL2Q6UWL6 708 aa17.13■□□□□ 0.33
PDLIM2-215ENST00000456545 PRSS41Q7RTY9 318 aa17.13■□□□□ 0.33
PDLIM2-215ENST00000456545 PARP9Q8IXQ6 854 aa17.13■□□□□ 0.33
PDLIM2-215ENST00000456545 RHEBL1Q8TAI7 183 aa17.13■□□□□ 0.33
PDLIM2-215ENST00000456545 NT5CQ8TCD5 201 aa17.13■□□□□ 0.33
PDLIM2-215ENST00000456545 ATOH8Q96SQ7 321 aa17.13■□□□□ 0.33
PDLIM2-215ENST00000456545 CCDC77Q9BR77 488 aa17.13■□□□□ 0.33
PDLIM2-215ENST00000456545 TGIF2Q9GZN2 237 aa17.13■□□□□ 0.33
PDLIM2-215ENST00000456545 OPTCQ9UBM4 332 aa17.13■□□□□ 0.33
PDLIM2-215ENST00000456545 PCDHGB7Q9Y5F8 929 aa17.13■□□□□ 0.33
PDLIM2-215ENST00000456545 CCDC189A1A4V9 331 aa17.12■□□□□ 0.33
PDLIM2-215ENST00000456545 SUV39H1O43463 412 aa17.12■□□□□ 0.33
PDLIM2-215ENST00000456545 RDH16O75452 317 aa17.12■□□□□ 0.33
PDLIM2-215ENST00000456545 BMP10O95393 424 aa17.12■□□□□ 0.33
PDLIM2-215ENST00000456545 ALDOAP04075 364 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-215ENST00000456545 SNRPAP09012 282 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-215ENST00000456545 ZNF888P0CJ79 500 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-215ENST00000456545 XCR1P46094 333 aa17.12■□□□□ 0.33
PDLIM2-215ENST00000456545 STXBP1P61764 594 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-215ENST00000456545 DEFB134Q4QY38 66 aa17.12■□□□□ 0.33
PDLIM2-215ENST00000456545 PAGE2BQ5JRK9 111 aa17.12■□□□□ 0.33
PDLIM2-215ENST00000456545 TOR1AIP1Q5JTV8 583 aa17.12■□□□□ 0.33
PDLIM2-215ENST00000456545 LRRC70Q7Z2Q7 622 aa17.12■□□□□ 0.33
PDLIM2-215ENST00000456545 CENPLQ8N0S6 344 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-215ENST00000456545 ANKRD53Q8N9V6 530 aa17.12■□□□□ 0.33
PDLIM2-215ENST00000456545 PTCD3Q96EY7 689 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-215ENST00000456545 FAR2Q96K12 515 aa17.12■□□□□ 0.33
PDLIM2-215ENST00000456545 PITHD1Q9GZP4 211 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-215ENST00000456545 CPSF2Q9P2I0 782 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-215ENST00000456545 ZNF180Q9UJW8 692 aa17.12■□□□□ 0.33
PDLIM2-215ENST00000456545 COL6A6A6NMZ7 2263 aa17.12■□□□□ 0.33
PDLIM2-215ENST00000456545 ATRXP46100 2492 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 MED13Q9UHV7 2174 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 NSG1A0A0A6YYJ2 146 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 ZNF860A6NHJ4 632 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 TRIM49D1C9J1S8 452 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 MASP2O00187 686 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 PCDH17O14917 1159 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 RIPK2O43353 540 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 DPM1O60762 260 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 CEACAM4O75871 244 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 SERPINA6P08185 405 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 ABHD2P08910 425 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 RBP1P09455 135 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 FAM153BP0C7A2 387 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 PLA2G2AP14555 144 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 EPB42P16452 691 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 HPDP32754 393 aaPredicted RBP17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 RAB8AP61006 207 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 CHIT1Q13231 466 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 DOC2AQ14183 400 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 MYBPC3Q14896 1274 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 PFKFB4Q16877 469 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 FAM153CQ494X1 144 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 ZC3H7AQ8IWR0 971 aaKnown RBP17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 LRRN4CLQ8ND94 238 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 OR11G2Q8NGC1 345 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 DCAKDQ8WVC6 231 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 C8orf44Q96CB5 159 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 PEX11GQ96HA9 241 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 EFCAB11Q9BUY7 163 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 NUDT9Q9BW91 350 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 EHD1Q9H4M9 534 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 NT5DC2Q9H857 520 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 L2HGDHQ9H9P8 463 aa17.11■□□□□ 0.33
PDLIM2-215ENST00000456545 J3QKU1 62 aa17.1■□□□□ 0.33
PDLIM2-215ENST00000456545 K7EPI3 171 aa17.1■□□□□ 0.33
PDLIM2-215ENST00000456545 GALR3O60755 368 aaPredicted RBP17.1■□□□□ 0.33
PDLIM2-215ENST00000456545 ALOX12BO75342 701 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms