RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 PRKRAO75569 313 aaKnown RBP3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 CPNE6O95741 557 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 IGHV4-39P01824 125 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 TSPY4P0CV99 314 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 TSPY10P0CW01 314 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 EFNA1P20827 205 aaPredicted RBP3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 CSTF2P33240 577 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 SFTPDP35247 375 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 CHRNA7P36544 502 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 MAGEA11P43364 429 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 FMO5P49326 533 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 PITX1P78337 314 aaPredicted RBP3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 RPP38P78345 283 aaKnown RBP3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 RBM39Q14498 530 aaKnown RBP3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 SQLEQ14534 574 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 OPCMLQ14982 345 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 STX1AQ16623 288 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 SLC35D3Q5M8T2 416 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 LDLRAP1Q5SW96 308 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 C20orf194Q5TEA3 1177 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 IRGCQ6NXR0 463 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 CCDC60Q8IWA6 550 aaPredicted RBP3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 RCOR2Q8IZ40 523 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 PRSS35Q8N3Z0 413 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 DNAJC22Q8N4W6 341 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 RNF148Q8N7C7 305 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 BANPQ8N9N5 519 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 TRPV3Q8NET8 790 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 OR56B1Q8NGI3 324 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 OR52B4Q8NGK2 314 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 OR2T34Q8NGX1 318 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 DQX1Q8TE96 717 aaKnown RBP3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 GPR137Q96N19 417 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 GUCD1Q96NT3 240 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 CTAGE1Q96RT6 745 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 TSPAN18Q96SJ8 248 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 ERP44Q9BS26 406 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 SLITRK6Q9H5Y7 841 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 FGF21Q9NSA1 209 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 FAM207AQ9NSI2 230 aaPredicted RBP3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 DUSP12Q9UNI6 340 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 RABL2BQ9UNT1 228 aa3.8□□□□□ -1.8
HMGN3P1-201ENST00000453847 IGLV9-49A0A0B4J1Y8 123 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 A0A1B0GWJ7 208 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 SERINC4A6NH21 518 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 ZNF732B4DXR9 585 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 PROB1E7EW31 1015 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 H3BNX3 289 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 ZNF197O14709 1029 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 CHADO15335 359 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 TEX28O15482 410 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 SYT7O43581 403 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 PPP1R3DO95685 299 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 EPOP01588 193 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 CRYABP02511 175 aaKnown RBP3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 PRSS2P07478 247 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 CETPP11597 493 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 LHCGRP22888 699 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 PTPN4P29074 926 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 ADSSP30520 456 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 TNFRSF4P43489 277 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 ABCG1P45844 678 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 NSFP46459 744 aaKnown RBP3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 HNMTP50135 292 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 NR0B1P51843 470 aaKnown RBP3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 HERV-K104P63124 156 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 GABPB1Q06547 395 aaPredicted RBP3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 SLC3A1Q07837 685 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 TRAF2Q12933 501 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 PDZK1IP1Q13113 114 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 SCGB2A2Q13296 93 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 SGCGQ13326 291 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 HSP90AA5PQ58FG0 334 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 ARMCX4Q5H9R4 360 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 UGT3A1Q6NUS8 523 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 KDELC1Q6UW63 502 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 DHRS11Q6UWP2 260 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 ZNF852Q6ZMS4 543 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 SLC16A9Q7RTY1 509 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 LCA5Q86VQ0 697 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 FAM133AQ8N9E0 248 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 SORCS1Q8WY21 1168 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 SEPT8Q92599 483 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 N4BP2L2Q92802 583 aaPredicted RBP3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 ULK4Q96C45 1275 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 NXPE2Q96DL1 559 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 PHF21BQ96EK2 531 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 CDCA3Q99618 268 aaPredicted RBP3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 THUMPD2Q9BTF0 503 aaKnown RBP3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 NUSAP1Q9BXS6 441 aaKnown RBP3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 KRTAP9-2Q9BYQ4 174 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 EGLN3Q9H6Z9 239 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 DCLRE1BQ9H816 532 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 PALMDQ9NP74 551 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 DDX28Q9NUL7 540 aaKnown RBP3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 PANK4Q9NVE7 773 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 PILRAQ9UKJ1 303 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 R4GN57 208 aa3.79□□□□□ -1.8
HMGN3P1-201ENST00000453847 DISP3Q9P2K9 1392 aa3.78□□□□□ -1.8
HMGN3P1-201ENST00000453847 MYH14Q7Z406 1995 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms