RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 TASP1Q9H6P5 420 aa4.12□□□□□ -1.75
LINC00393-202ENST00000452852 SLA2Q9H6Q3 261 aa4.12□□□□□ -1.75
LINC00393-202ENST00000452852 TLE6Q9H808 572 aa4.12□□□□□ -1.75
LINC00393-202ENST00000452852 TUFT1Q9NNX1 390 aa4.12□□□□□ -1.75
LINC00393-202ENST00000452852 NOX4Q9NPH5 578 aa4.12□□□□□ -1.75
LINC00393-202ENST00000452852 DPP3Q9NY33 737 aa4.12□□□□□ -1.75
LINC00393-202ENST00000452852 CPSF3Q9UKF6 684 aaKnown RBP4.12□□□□□ -1.75
LINC00393-202ENST00000452852 TDRD15B5MCY1 1934 aaKnown RBP4.11□□□□□ -1.75
LINC00393-202ENST00000452852 IGKV2D-30A0A075B6S6 120 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 IGKV6D-21A0A0A0MT36 114 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 A0A0A6YYC8 382 aaPredicted RBP4.11□□□□□ -1.75
LINC00393-202ENST00000452852 PRSS51A0A1B0GVH4 220 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 A0A1W2PPQ1 181 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 ESYT2A0FGR8 921 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 GAGE12JA6NER3 117 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 I3L1I5 382 aaPredicted RBP4.11□□□□□ -1.75
LINC00393-202ENST00000452852 SOCS6O14544 535 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 WNT9BO14905 357 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 MAGEB2O15479 319 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 MBTPS2O43462 519 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 VEGFDO43915 354 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 SEC22BO75396 215 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 BCAS2O75934 225 aaPredicted RBP4.11□□□□□ -1.75
LINC00393-202ENST00000452852 AKAP3O75969 853 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 REC8O95072 547 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 VTNP04004 478 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 PTMAP06454 111 aaKnown RBP4.11□□□□□ -1.75
LINC00393-202ENST00000452852 OR2T7P0C7T2 308 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 NAGAP17050 411 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 PSMA5P28066 241 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 SFNP31947 248 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 CCKARP32238 428 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 CA8P35219 290 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 SOAT1P35610 550 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 CDKN2AP42771 156 aaKnown RBP4.11□□□□□ -1.75
LINC00393-202ENST00000452852 MAPK12P53778 367 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 TPD52P55327 224 aaPredicted RBP4.11□□□□□ -1.75
LINC00393-202ENST00000452852 SNU13P55769 128 aaKnown RBP4.11□□□□□ -1.75
LINC00393-202ENST00000452852 POLR2FP61218 127 aaKnown RBP4.11□□□□□ -1.75
LINC00393-202ENST00000452852 PLA2G7Q13093 441 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 ITGB3BPQ13352 177 aaPredicted RBP4.11□□□□□ -1.75
LINC00393-202ENST00000452852 GPR18Q14330 331 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 HNF4GQ14541 408 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 CTF1Q16619 201 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 UGCGQ16739 394 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 KBTBD12Q3ZCT8 623 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 SETMARQ53H47 684 aaPredicted RBP4.11□□□□□ -1.75
LINC00393-202ENST00000452852 TCTE1Q5JU00 501 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 TYW3Q6IPR3 259 aaKnown RBP4.11□□□□□ -1.75
LINC00393-202ENST00000452852 PARM1Q6UWI2 310 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 SLC24A5Q71RS6 500 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 BTN2A1Q7KYR7 527 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 RABEPKQ7Z6M1 372 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 TMPRSS11BQ86T26 416 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 RBM23Q86U06 439 aaKnown RBP4.11□□□□□ -1.75
LINC00393-202ENST00000452852 CCDC60Q8IWA6 550 aaPredicted RBP4.11□□□□□ -1.75
LINC00393-202ENST00000452852 CLYBLQ8N0X4 340 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 SLC5A8Q8N695 610 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 GCSAMQ8N6F7 178 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 NEK11Q8NG66 645 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 OR5M8Q8NGP6 311 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 C9orf43Q8TAL5 461 aaPredicted RBP4.11□□□□□ -1.75
LINC00393-202ENST00000452852 MARK4Q96L34 752 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 LRFN5Q96NI6 719 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 MTERF1Q99551 399 aaKnown RBP4.11□□□□□ -1.75
LINC00393-202ENST00000452852 ZNF350Q9GZX5 532 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 C17orf75Q9HAS0 396 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 HHATLQ9HCP6 504 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 RGS18Q9NS28 235 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 NRBP2Q9NSY0 501 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 NPAP1Q9NZP6 1156 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 VPS18Q9P253 973 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 RCC2Q9P258 522 aaKnown RBP4.11□□□□□ -1.75
LINC00393-202ENST00000452852 LEF1Q9UJU2 399 aaPredicted RBP4.11□□□□□ -1.75
LINC00393-202ENST00000452852 PAM16Q9Y3D7 125 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 USP34Q70CQ2 3546 aa4.11□□□□□ -1.75
LINC00393-202ENST00000452852 KMT2EQ8IZD2 1858 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 IGLV3-22A0A075B6J6 115 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 hDV102S1A0JD36 115 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 SYCE3A1L190 88 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 OR2M5A3KFT3 312 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 BECN2A8MW95 431 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 MS4A18H0YCH9 400 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 CPLX1O14810 134 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 TNFRSF13BO14836 293 aaPredicted RBP4.1□□□□□ -1.75
LINC00393-202ENST00000452852 LINC01565O15544 149 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 SMAD6O43541 496 aaKnown RBP4.1□□□□□ -1.75
LINC00393-202ENST00000452852 CHMP2AO43633 222 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 OR10H2O60403 315 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 CCNE2O96020 404 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 CYP1A2P05177 515 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 PLA2G4BP0C869 781 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 MAPK3P27361 379 aaPredicted RBP4.1□□□□□ -1.75
LINC00393-202ENST00000452852 TIA1P31483 386 aaKnown RBP eCLIP4.1□□□□□ -1.75
LINC00393-202ENST00000452852 PGGT1BP53609 377 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 NLRP11P59045 1033 aaKnown RBP4.1□□□□□ -1.75
LINC00393-202ENST00000452852 KIAA1024LP59773 190 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 COG7P83436 770 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 PRKCEQ02156 737 aa4.1□□□□□ -1.75
LINC00393-202ENST00000452852 CRYZQ08257 329 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms