RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 MT-CYBP00156 380 aaPredicted RBP8.33□□□□□ -1.08
LSM5-208ENST00000450169 APOC1P02654 83 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 LCP1P13796 627 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 PRDX3P30048 256 aaKnown RBP8.33□□□□□ -1.08
LSM5-208ENST00000450169 SSTR2P30874 369 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 CENPAP49450 140 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 PCDH1Q08174 1060 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 CSTF3Q12996 717 aaKnown RBP8.33□□□□□ -1.08
LSM5-208ENST00000450169 DMC1Q14565 340 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 LTB4RQ15722 352 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 PAN2Q504Q3 1202 aaKnown RBP8.33□□□□□ -1.08
LSM5-208ENST00000450169 CCDC117Q8IWD4 279 aaPredicted RBP8.33□□□□□ -1.08
LSM5-208ENST00000450169 CDAN1Q8IWY9 1227 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 CDH26Q8IXH8 852 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 PHACTR4Q8IZ21 702 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 PGBD3Q8N328 593 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 Q8N402 240 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 PNPLA1Q8N8W4 532 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 DCBLD1Q8N8Z6 715 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 AGBL3Q8NEM8 1001 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.33□□□□□ -1.087e-7■■■□□ 16.2
LSM5-208ENST00000450169 ASB12Q8WXK4 309 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 CREB3L1Q96BA8 519 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 ZNF419Q96HQ0 510 aaPredicted RBP8.33□□□□□ -1.08
LSM5-208ENST00000450169 HPDLQ96IR7 371 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 CELF6Q96J87 481 aaKnown RBP8.33□□□□□ -1.08
LSM5-208ENST00000450169 MSLNLQ96KJ4 702 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 KCNC2Q96PR1 638 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 FICDQ9BVA6 458 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 CDCA4Q9BXL8 241 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 REG4Q9BYZ8 158 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 MCOLN1Q9GZU1 580 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 MED28Q9H204 178 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 SRA1Q9HD15 236 aaKnown RBP8.33□□□□□ -1.08
LSM5-208ENST00000450169 SLC25A37Q9NYZ2 338 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 KIF25Q9UIL4 384 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 SAMD4AQ9UPU9 718 aaKnown RBP8.33□□□□□ -1.08
LSM5-208ENST00000450169 FNDC1Q4ZHG4 1894 aaPredicted RBP8.33□□□□□ -1.08
LSM5-208ENST00000450169 TUBAL3A6NHL2 446 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 QSOX1O00391 747 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 BTN3A1O00481 513 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 SYN3O14994 580 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 OLFM2O95897 454 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 CFDP00746 253 aaPredicted RBP8.32□□□□□ -1.08
LSM5-208ENST00000450169 NCF1P14598 390 aaPredicted RBP8.32□□□□□ -1.08
LSM5-208ENST00000450169 DARSP14868 501 aaKnown RBP8.32□□□□□ -1.08
LSM5-208ENST00000450169 CD9P21926 228 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 AKT1P31749 480 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 MATKP42679 507 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 IDH2P48735 452 aaKnown RBP8.32□□□□□ -1.08
LSM5-208ENST00000450169 MXD1Q05195 221 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 DGKZQ13574 1117 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 CDH18Q13634 790 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 ETFDHQ16134 617 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 SNAPC1Q16533 368 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 MICAQ29983 383 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 SLC25A52Q3SY17 297 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 KLHL22Q53GT1 634 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 FBXO48Q5FWF7 155 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 MPP7Q5T2T1 576 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 ANKS6Q68DC2 871 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 BICRALQ6AI39 1079 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 ALG1LQ6GMV1 187 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 ERICH5Q6P6B1 374 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 ABHD15Q6UXT9 468 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 GDPGP1Q6ZNW5 385 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 ABI3BPQ7Z7G0 1075 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 LUZP2Q86TE4 346 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 DDX53Q86TM3 631 aaKnown RBP8.32□□□□□ -1.08
LSM5-208ENST00000450169 ACOT1Q86TX2 421 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 MSRB3Q8IXL7 192 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 ZZZ3Q8IYH5 903 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 CPXCR1Q8N123 301 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 MS4A15Q8N5U1 240 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 SH3RF2Q8TEC5 729 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 MYLPFQ96A32 169 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 SLC25A46Q96AG3 418 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 SPACA7Q96KW9 195 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 DPYSL5Q9BPU6 564 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 IER2Q9BTL4 223 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 PITHD1Q9GZP4 211 aaPredicted RBP8.32□□□□□ -1.08
LSM5-208ENST00000450169 EMC7Q9NPA0 242 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 C1orf109Q9NX04 203 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 THUMPD1Q9NXG2 353 aaKnown RBP8.32□□□□□ -1.08
LSM5-208ENST00000450169 EMC3Q9P0I2 261 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 ZNF222Q9UK12 451 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 NCKAP1Q9Y2A7 1128 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 SUPT3HB4E1H0 165 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 FAM72CH0Y354 149 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 CBX4O00257 560 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 SLC30A4O14863 429 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 PER2O15055 1255 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 PRAMEF1O95521 474 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 LGI1O95970 557 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 C9P02748 559 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 FABP3P05413 133 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 RPS17P08708 135 aaKnown RBP8.32□□□□□ -1.08
LSM5-208ENST00000450169 ANXA3P12429 323 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 HLA-EP13747 358 aa8.32□□□□□ -1.08
LSM5-208ENST00000450169 PSMA1P25786 263 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms