RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 TRIM8Q9BZR9 551 aa13.64□□□□□ -0.23
USP39-207ENST00000450066 ALG2Q9H553 416 aa13.64□□□□□ -0.23
USP39-207ENST00000450066 MYNNQ9NPC7 610 aa13.64□□□□□ -0.23
USP39-207ENST00000450066 FAM120CQ9NX05 1096 aaKnown RBP13.64□□□□□ -0.23
USP39-207ENST00000450066 VAPAQ9P0L0 249 aa13.64□□□□□ -0.23
USP39-207ENST00000450066 NEUROG3Q9Y4Z2 214 aa13.64□□□□□ -0.23
USP39-207ENST00000450066 MUC3AQ02505 3323 aa13.64□□□□□ -0.23
USP39-207ENST00000450066 A0A096LPI6 279 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 OR6C74A6NCV1 312 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 GABRR3A8MPY1 467 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 DNAJA2O60884 412 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 KLHL18O94889 574 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 GBAP04062 536 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 BCL6P41182 706 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 GRIA3P42263 894 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 PLIN5Q00G26 463 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 SLC34A1Q06495 639 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 SIGLEC14Q08ET2 396 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 BNIP2Q12982 314 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 WDR45BQ5MNZ6 344 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 CPTPQ5TA50 214 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 OR4F3Q6IEY1 312 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 IKBIPQ70UQ0 350 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 PAGE2Q7Z2X7 111 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 PAQR7Q86WK9 346 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 SFTPA2Q8IWL1 248 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 C16orf78Q8WTQ4 265 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 PYDC1Q8WXC3 89 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 RGMAQ96B86 450 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 ZNF717Q9BY31 904 aaPredicted RBP13.63□□□□□ -0.23
USP39-207ENST00000450066 REXO4Q9GZR2 422 aaKnown RBP13.63□□□□□ -0.23
USP39-207ENST00000450066 PAIP1Q9H074 479 aaKnown RBP13.63□□□□□ -0.23
USP39-207ENST00000450066 ENTPD2Q9Y5L3 495 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 AP1M2Q9Y6Q5 423 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 KNL1Q8NG31 2342 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 USP34Q70CQ2 3546 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 TRBV5-3A0A0A0MS03 114 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 VILLO15195 856 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 DFNA5O60443 496 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 SCN2BO60939 215 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 TPP2P29144 1249 aaPredicted RBP13.63□□□□□ -0.23
USP39-207ENST00000450066 BSGP35613 385 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 RPL3P39023 403 aaKnown RBP13.63□□□□□ -0.23
USP39-207ENST00000450066 GSK3BP49841 420 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 LIPEQ05469 1076 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 ZIC1Q15915 447 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 TMEM35AQ53FP2 167 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 GKN2Q86XP6 184 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 MSRB3Q8IXL7 192 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 TMEM132CQ8N3T6 1108 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 TRPV3Q8NET8 790 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 COQ8BQ96D53 544 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 QRFPRQ96P65 431 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 SH3GL1Q99961 368 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 REEP4Q9H6H4 257 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 SLC25A37Q9NYZ2 338 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 ACTR10Q9NZ32 417 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 STOML1Q9UBI4 398 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 SPASTQ9UBP0 616 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 ATP6V1HQ9UI12 483 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 EXO1Q9UQ84 846 aaKnown RBP13.63□□□□□ -0.23
USP39-207ENST00000450066 WBP11Q9Y2W2 641 aaKnown RBP13.63□□□□□ -0.23
USP39-207ENST00000450066 ABCA7Q8IZY2 2146 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 EML5Q05BV3 1969 aa13.63□□□□□ -0.23
USP39-207ENST00000450066 LRIT2A6NDA9 550 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 NDUFS4O43181 175 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 TNFSF14O43557 240 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 PDGFBP01127 241 aaPredicted RBP13.62□□□□□ -0.23
USP39-207ENST00000450066 LAMP1P11279 417 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 PIM1P11309 404 aaPredicted RBP13.62□□□□□ -0.23
USP39-207ENST00000450066 ANPEPP15144 967 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 UGT2B7P16662 529 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 POLR2CP19387 275 aaPredicted RBP13.62□□□□□ -0.23
USP39-207ENST00000450066 PTPN6P29350 595 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 TRPC1P48995 793 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 AFF3P51826 1226 aaKnown RBP13.62□□□□□ -0.23
USP39-207ENST00000450066 WNT3P56703 355 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 TAS2R50P59544 299 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 HNRNPKP61978 463 aaKnown RBP eCLIP13.62□□□□□ -0.23
USP39-207ENST00000450066 HHEXQ03014 270 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 DUOXA1Q1HG43 343 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 RUNDC3AQ59EK9 446 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 CCNYL2Q5T2Q4 361 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 FAM71E1Q6IPT2 247 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 TMEM26Q6ZUK4 368 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 R3HCC1LQ7Z5L2 792 aaKnown RBP13.62□□□□□ -0.23
USP39-207ENST00000450066 ANKRD46Q86W74 232 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 DHFR2Q86XF0 187 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 PTRH1Q86Y79 214 aaKnown RBP13.62□□□□□ -0.23
USP39-207ENST00000450066 AVL9Q8NBF6 648 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 MFSD9Q8NBP5 474 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 OR10G6Q8NH81 332 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 NELL1Q92832 810 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 MTERF3Q96E29 417 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 DUSP26Q9BV47 211 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 MUC13Q9H3R2 512 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 GMPR2Q9P2T1 348 aaKnown RBP13.62□□□□□ -0.23
USP39-207ENST00000450066 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.62□□□□□ -0.23
USP39-207ENST00000450066 ADAM29Q9UKF5 820 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 ANGPTL2Q9UKU9 493 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms