RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 ZNF282Q9UDV7 671 aaPredicted RBP13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 LGALS13Q9UHV8 139 aa13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 NXT1Q9UKK6 140 aaKnown RBP13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 GRID1Q9ULK0 1009 aa13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 PTRH2Q9Y3E5 179 aaKnown RBP13.33□□□□□ -0.28
GTF3C3-206ENST00000448539 CCDC151A5D8V7 595 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 LRRC14BA6NHZ5 514 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 A8MT66 165 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 E2F3O00716 465 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 NSA2O95478 260 aaKnown RBP13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 ONECUT2O95948 504 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 SERPINA6P08185 405 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 MYL2P10916 166 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 PCNAP12004 261 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 IL1RNP18510 177 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 EPORP19235 508 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 ATP5F1P24539 256 aaPredicted RBP13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 CRHR1P34998 444 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 HNF4AP41235 474 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 CASP2P42575 452 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 CCNG1P51959 295 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 NFKB2Q00653 900 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 RHDQ02161 417 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 DSG2Q14126 1118 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 LIPJQ5W064 366 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 MRPL14Q6P1L8 145 aaKnown RBP13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 MED27Q6P2C8 311 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 COX15Q7KZN9 410 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 CROCCP2Q86T23 111 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 RAB43Q86YS6 212 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 SLC22A9Q8IVM8 553 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 DTWD1Q8N5C7 304 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 OR9A4Q8NGU2 314 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 MIEF2Q96C03 454 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 CCDC126Q96EE4 140 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 MOCOSQ96EN8 888 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 NOL11Q9H8H0 719 aaKnown RBP13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 RRAGDQ9NQL2 400 aaPredicted RBP13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 SLC22A11Q9NSA0 550 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 COPG2Q9UBF2 871 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 TRPC4Q9UBN4 977 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 MRPS2Q9Y399 296 aaKnown RBP13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 SLC22A7Q9Y694 548 aa13.32□□□□□ -0.28
GTF3C3-206ENST00000448539 ATRXP46100 2492 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 H0YIG0 161 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 RGS16O15492 202 aaPredicted RBP13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 FOXS1O43638 330 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 UGDHO60701 494 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 PRAMEF4O60810 478 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 CLEC3AO75596 197 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 WFS1O76024 890 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 SBK3P0C264 359 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 ALOX12P18054 663 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 ITGAXP20702 1163 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 SERPINB1P30740 379 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 HERVK_113P63132 956 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 PHEXP78562 749 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 SLC18A2Q05940 514 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 PCDH1Q08174 1060 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 SSPNQ14714 243 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 RBBP7Q16576 425 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 UGT8Q16880 541 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 DEFB109BQ30KR1 87 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 TOR1AIP1Q5JTV8 583 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 CEP85LQ5SZL2 805 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 PRAMEF9Q5VWM5 478 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 GRHL2Q6ISB3 625 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 SH2D5Q6ZV89 423 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 TRABD2AQ86V40 505 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 SRRM1Q8IYB3 904 aaKnown RBP13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 TMEM151AQ8N4L1 468 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 ARHGEF39Q8N4T4 335 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 OR2Y1Q8NGV0 311 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 CREB3L4Q8TEY5 395 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 THAP4Q8WY91 577 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 REPS1Q96D71 796 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 FAR2Q96K12 515 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 SMC6Q96SB8 1091 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 ARHGAP9Q9BRR9 750 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 ERVK-6Q9BXR3 956 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 SLC6A16Q9GZN6 736 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 SLC26A1Q9H2B4 701 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 CENPHQ9H3R5 247 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 WDR54Q9H977 334 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 MKKSQ9NPJ1 570 aaPredicted RBP13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 SEMA4BQ9NPR2 832 aaPredicted RBP13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 CTSFQ9UBX1 484 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 ADGRE2Q9UHX3 823 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 MID2Q9UJV3 735 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 PCTPQ9UKL6 214 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 POLHQ9Y253 713 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 MAP4K5Q9Y4K4 846 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 PCDHGA11Q9Y5H2 935 aa13.31□□□□□ -0.28
GTF3C3-206ENST00000448539 A0A088AWK7 358 aa13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 SGK494L7N484 410 aa13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 DLX3O60479 287 aa13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 KLF7O75840 302 aaPredicted RBP13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 SUPT7LO94864 414 aa13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 KLHL18O94889 574 aa13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 CLDN9O95484 217 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms