RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 ACTR3P61158 418 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 RPS15AP62244 130 aaKnown RBP7.14□□□□□ -1.27
SYNE1-213ENST00000448038 NKX3-2P78367 333 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 CDK6Q00534 326 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 FAM92BQ6ZTR7 304 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 SLC29A4Q7RTT9 530 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 KRTCAP2Q8N6L1 136 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 OR56A1Q8NGH5 318 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 PIGXQ8TBF5 258 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 RBCK1Q9BYM8 510 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 C1orf21Q9H246 121 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 IL21Q9HBE4 155 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 SMPD3Q9NY59 655 aaPredicted RBP7.14□□□□□ -1.27
SYNE1-213ENST00000448038 IL37Q9NZH6 218 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 DNMT3AQ9Y6K1 912 aaPredicted RBP7.14□□□□□ -1.27
SYNE1-213ENST00000448038 E7EQ34 232 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 SNNO75324 88 aaPredicted RBP7.14□□□□□ -1.27
SYNE1-213ENST00000448038 CCNB2O95067 398 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 BCL10O95999 233 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 PEX2P28328 305 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 CCKBRP32239 447 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 ABHD18Q0P651 414 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 SLAMF1Q13291 335 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 LASP1Q14847 261 aaKnown RBP7.14□□□□□ -1.27
SYNE1-213ENST00000448038 DUS1LQ6P1R4 473 aaKnown RBP7.14□□□□□ -1.27
SYNE1-213ENST00000448038 RFLNAQ6ZTI6 216 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 PDZD3Q86UT5 571 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 OR4K14Q8NGD5 310 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 MYADMQ96S97 322 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 PRRG4Q9BZD6 226 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 RASSF1Q9NS23 344 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 FAM53CQ9NYF3 392 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 HCN3Q9P1Z3 774 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 CFL2Q9Y281 166 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 WASF2Q9Y6W5 498 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 DOCK5Q9H7D0 1870 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 hCG_2014768A0A024R1R8 64 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 FAM92AA1XBS5 289 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 GPR89AB7ZAQ6 455 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 PRMT3O60678 531 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 SYPP08247 313 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 IL3P08700 152 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 JMJD7P0C870 316 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 GPR89BP0CG08 455 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 POU2F1P14859 743 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 ATP5A1P25705 553 aaKnown RBP7.14□□□□□ -1.27
SYNE1-213ENST00000448038 SLC7A1P30825 629 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 NUDT1P36639 197 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 MTTPP55157 894 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 MLF2Q15773 248 aaPredicted RBP7.14□□□□□ -1.27
SYNE1-213ENST00000448038 DENND5AQ6IQ26 1287 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 NIPAL1Q6NVV3 410 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 FIGLAQ6QHK4 219 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 GALNT7Q86SF2 657 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 NRROSQ86YC3 692 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 SVOPLQ8N434 492 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 CSNK1A1LQ8N752 337 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 ACVR1CQ8NER5 493 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 CANT1Q8WVQ1 401 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 GTPBP3Q969Y2 492 aaKnown RBP7.14□□□□□ -1.27
SYNE1-213ENST00000448038 RNFT2Q96EX2 444 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 HSPA12BQ96MM6 686 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 ZNF347Q96SE7 839 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 UBE2ZQ9H832 354 aaPredicted RBP7.14□□□□□ -1.27
SYNE1-213ENST00000448038 DNAJB9Q9UBS3 223 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 IRAK3Q9Y616 596 aa7.14□□□□□ -1.27
SYNE1-213ENST00000448038 BCKDKO14874 412 aa7.13□□□□□ -1.27
SYNE1-213ENST00000448038 PGM3O95394 542 aa7.13□□□□□ -1.27
SYNE1-213ENST00000448038 NPPAP01160 153 aa7.13□□□□□ -1.27
SYNE1-213ENST00000448038 PRLP01236 227 aa7.13□□□□□ -1.27
SYNE1-213ENST00000448038 AK4P27144 223 aaPredicted RBP7.13□□□□□ -1.27
SYNE1-213ENST00000448038 CCR2P41597 374 aa7.13□□□□□ -1.27
SYNE1-213ENST00000448038 INAQ16352 499 aa7.13□□□□□ -1.27
SYNE1-213ENST00000448038 SNAPC1Q16533 368 aa7.13□□□□□ -1.27
SYNE1-213ENST00000448038 CTSL3PQ5NE16 218 aa7.13□□□□□ -1.27
SYNE1-213ENST00000448038 KANK2Q63ZY3 851 aa7.13□□□□□ -1.27
SYNE1-213ENST00000448038 TREML1Q86YW5 311 aa7.13□□□□□ -1.27
SYNE1-213ENST00000448038 CCDC116Q8IYX3 515 aa7.13□□□□□ -1.27
SYNE1-213ENST00000448038 OR2L2Q8NH16 312 aa7.13□□□□□ -1.27
SYNE1-213ENST00000448038 NFKBIDQ8NI38 313 aa7.13□□□□□ -1.27
SYNE1-213ENST00000448038 FAM81AQ8TBF8 368 aa7.13□□□□□ -1.27
SYNE1-213ENST00000448038 TSPEARQ8WU66 669 aa7.13□□□□□ -1.27
SYNE1-213ENST00000448038 GPATCH1Q9BRR8 931 aaKnown RBP7.13□□□□□ -1.27
SYNE1-213ENST00000448038 DCUN1D5Q9BTE7 237 aa7.13□□□□□ -1.27
SYNE1-213ENST00000448038 TBL1XR1Q9BZK7 514 aa7.13□□□□□ -1.27
SYNE1-213ENST00000448038 EBF2Q9HAK2 575 aa7.13□□□□□ -1.27
SYNE1-213ENST00000448038 AIG1Q9NVV5 245 aa7.13□□□□□ -1.27
SYNE1-213ENST00000448038 PLXNB2O15031 1838 aa7.13□□□□□ -1.27
SYNE1-213ENST00000448038 M0QX08 132 aa7.13□□□□□ -1.27
SYNE1-213ENST00000448038 RTCAO00442 366 aaKnown RBP7.13□□□□□ -1.27
SYNE1-213ENST00000448038 TP73O15350 636 aa7.13□□□□□ -1.27
SYNE1-213ENST00000448038 PRKD3O94806 890 aa7.13□□□□□ -1.27
SYNE1-213ENST00000448038 EGFP01133 1207 aa7.13□□□□□ -1.27
SYNE1-213ENST00000448038 ETV4P43268 484 aa7.13□□□□□ -1.27
SYNE1-213ENST00000448038 MAGEA3P43357 314 aa7.13□□□□□ -1.27
SYNE1-213ENST00000448038 PRLHRP49683 370 aa7.13□□□□□ -1.27
SYNE1-213ENST00000448038 GALNT1Q10472 559 aaPredicted RBP7.13□□□□□ -1.27
SYNE1-213ENST00000448038 TMEM31Q5JXX7 168 aa7.13□□□□□ -1.27
SYNE1-213ENST00000448038 CDKL4Q5MAI5 379 aa7.13□□□□□ -1.27
SYNE1-213ENST00000448038 FAM220AQ7Z4H9 259 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms