RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-208ENST00000447995 HMGCS1Q01581 520 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 IRF8Q02556 426 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 UBE3AQ05086 875 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 ABHD18Q0P651 414 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 LRRC74AQ0VAA2 488 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 HSPA14Q0VDF9 509 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 TOP3AQ13472 1001 aaPredicted RBP3.92□□□□□ -1.78
PTPN12-208ENST00000447995 IL18R1Q13478 541 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 DAG1Q14118 895 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 KIAA0040Q15053 153 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 PTPRRQ15256 657 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 C18orf21Q32NC0 220 aaPredicted RBP3.92□□□□□ -1.78
PTPN12-208ENST00000447995 FAM174BQ3ZCQ3 159 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 SLC36A3Q495N2 470 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 ZBED5Q49AG3 693 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 NADK2Q4G0N4 442 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 ATP13A5Q4VNC0 1218 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 RFTN2Q52LD8 501 aaPredicted RBP3.92□□□□□ -1.78
PTPN12-208ENST00000447995 USP39Q53GS9 565 aaKnown RBP3.92□□□□□ -1.78
PTPN12-208ENST00000447995 RUNDC3AQ59EK9 446 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 SGO1Q5FBB7 561 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 SPANXN4Q5MJ08 99 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 CCNYL2Q5T2Q4 361 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 AP1ARQ63HQ0 302 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 ERICH5Q6P6B1 374 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 DPY19L3Q6ZPD9 716 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 SPATA31D4Q6ZUB0 917 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 DPPA4Q7L190 304 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 GPR141Q7Z602 305 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 NECAB2Q7Z6G3 386 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 KIAA0907Q7Z7F0 614 aaPredicted RBP3.92□□□□□ -1.78
PTPN12-208ENST00000447995 PATL1Q86TB9 770 aaKnown RBP3.92□□□□□ -1.78
PTPN12-208ENST00000447995 TSPAN33Q86UF1 283 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 GPR180Q86V85 440 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 EPHX4Q8IUS5 362 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 ADHFE1Q8IWW8 467 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 RIMKLAQ8IXN7 391 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 KLHDC8AQ8IYD2 350 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 NRSN1Q8IZ57 195 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 CLEC4FQ8N1N0 589 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 ZNF786Q8N393 782 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 ZCCHC7Q8N3Z6 543 aaKnown RBP3.92□□□□□ -1.78
PTPN12-208ENST00000447995 DCBLD1Q8N8Z6 715 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 FAM47BQ8NA70 645 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 ZNF548Q8NEK5 533 aaPredicted RBP3.92□□□□□ -1.78
PTPN12-208ENST00000447995 DDHD1Q8NEL9 900 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 ZNF555Q8NEP9 628 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 VPS37AQ8NEZ2 397 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 CYGBQ8WWM9 190 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 ELMO1Q92556 727 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 GTF2H4Q92759 462 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 NELL1Q92832 810 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 NCLNQ969V3 563 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 FAM162AQ96A26 154 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 TMEM159Q96B96 161 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 TESCQ96BS2 214 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 REPS1Q96D71 796 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 FAM120BQ96EK7 910 aaKnown RBP3.92□□□□□ -1.78
PTPN12-208ENST00000447995 NRBF2Q96F24 287 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 AURKBQ96GD4 344 aaPredicted RBP3.92□□□□□ -1.78
PTPN12-208ENST00000447995 CNDP2Q96KP4 475 aaKnown RBP3.92□□□□□ -1.78
PTPN12-208ENST00000447995 RPL10LQ96L21 214 aaKnown RBP3.92□□□□□ -1.78
PTPN12-208ENST00000447995 TEX37Q96LM6 180 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 CCDC138Q96M89 665 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 ZNF583Q96ND8 569 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 VPS35Q96QK1 796 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 FERD3LQ96RJ6 166 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 SLC29A1Q99808 456 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 RBM4BQ9BQ04 359 aaKnown RBP3.92□□□□□ -1.78
PTPN12-208ENST00000447995 CPPED1Q9BRF8 314 aaPredicted RBP3.92□□□□□ -1.78
PTPN12-208ENST00000447995 CCM2Q9BSQ5 444 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 RBM4Q9BWF3 364 aaKnown RBP3.92□□□□□ -1.78
PTPN12-208ENST00000447995 SPATA9Q9BWV2 254 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 KCNH6Q9H252 994 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 ACTL8Q9H568 366 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 EPHX3Q9H6B9 360 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 C11orf49Q9H6J7 331 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 RPF2Q9H7B2 306 aaKnown RBP3.92□□□□□ -1.78
PTPN12-208ENST00000447995 GP6Q9HCN6 339 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 IL23AQ9NPF7 189 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 SPHK2Q9NRA0 654 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 TDP1Q9NUW8 608 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 OLAHQ9NV23 265 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 INTS7Q9NVH2 962 aaKnown RBP3.92□□□□□ -1.78
PTPN12-208ENST00000447995 FAM120CQ9NX05 1096 aaKnown RBP3.92□□□□□ -1.78
PTPN12-208ENST00000447995 DUS2Q9NX74 493 aaKnown RBP3.92□□□□□ -1.78
PTPN12-208ENST00000447995 GPRC5BQ9NZH0 403 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 DKK3Q9UBP4 350 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 DNAJB9Q9UBS3 223 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 RSL24D1Q9UHA3 163 aaKnown RBP3.92□□□□□ -1.78
PTPN12-208ENST00000447995 BLOC1S6Q9UL45 172 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 SAMD4AQ9UPU9 718 aaKnown RBP3.92□□□□□ -1.78
PTPN12-208ENST00000447995 CORO2BQ9UQ03 480 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 PDE10AQ9Y233 779 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 RUVBL1Q9Y265 456 aaKnown RBP3.92□□□□□ -1.78
PTPN12-208ENST00000447995 INVSQ9Y283 1065 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 RNF11Q9Y3C5 154 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 CCL27Q9Y4X3 112 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 INSL6Q9Y581 213 aa3.92□□□□□ -1.78
PTPN12-208ENST00000447995 FADS3Q9Y5Q0 445 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms