RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 FIGNL2A6NMB9 653 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 H7C0C1 242 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 ARHGEF9O43307 516 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 PEX1O43933 1283 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 C1orf105O95561 183 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 FTCDO95954 541 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 APOA4P06727 396 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 RBP3P10745 1247 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 EZRP15311 586 aaKnown RBP6.64□□□□□ -1.35
LRRC28-203ENST00000447360 MSNP26038 577 aaKnown RBP6.64□□□□□ -1.35
LRRC28-203ENST00000447360 ACVR2AP27037 513 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 TPP2P29144 1249 aaPredicted RBP6.64□□□□□ -1.35
LRRC28-203ENST00000447360 CCNFP41002 786 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 EIF1AXP47813 144 aaKnown RBP6.64□□□□□ -1.35
LRRC28-203ENST00000447360 ATP5OP48047 213 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 HLCSP50747 726 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 CSE1LP55060 971 aaKnown RBP6.64□□□□□ -1.35
LRRC28-203ENST00000447360 EIF3EP60228 445 aaKnown RBP6.64□□□□□ -1.35
LRRC28-203ENST00000447360 NKX6-1P78426 367 aaPredicted RBP6.64□□□□□ -1.35
LRRC28-203ENST00000447360 PPP2R2BQ00005 443 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 MAT1AQ00266 395 aaKnown RBP6.64□□□□□ -1.35
LRRC28-203ENST00000447360 KLF1Q13351 362 aaPredicted RBP6.64□□□□□ -1.35
LRRC28-203ENST00000447360 NSDHLQ15738 373 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 NDUFA9Q16795 377 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 FLYWCH1Q4VC44 716 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 ANKRD20A2Q5SQ80 823 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 MFSD4BQ5TF39 518 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 ANKRD20A1Q5TYW2 823 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 ANKRD20A3Q5VUR7 823 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 PAPD4Q6PIY7 484 aaKnown RBP6.64□□□□□ -1.35
LRRC28-203ENST00000447360 B3GNT6Q6ZMB0 384 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 PEX26Q7Z412 305 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 KIAA1328Q86T90 577 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 LIX1LQ8IVB5 337 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 KLHDC8BQ8IXV7 354 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 ARMC10Q8N2F6 343 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 RNF10Q8N5U6 811 aaKnown RBP6.64□□□□□ -1.35
LRRC28-203ENST00000447360 MAGEC3Q8TD91 643 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 MCOLN3Q8TDD5 553 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 CREB3L4Q8TEY5 395 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 ALS2CR12Q96Q35 445 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 TBL1YQ9BQ87 522 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 FERMT1Q9BQL6 677 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 CARD6Q9BX69 1037 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 PLEKHF2Q9H8W4 249 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 DMRT3Q9NQL9 472 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 BEX4Q9NWD9 120 aaPredicted RBP6.64□□□□□ -1.35
LRRC28-203ENST00000447360 CBLCQ9ULV8 474 aa6.64□□□□□ -1.35
LRRC28-203ENST00000447360 R3HDM2Q9Y2K5 976 aaKnown RBP6.64□□□□□ -1.35
LRRC28-203ENST00000447360 IGKV1-8A0A0C4DH67 115 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 A0A0G2JNJ9 132 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 MROH6A6NGR9 719 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 MIF4GDA9UHW6 222 aaKnown RBP6.63□□□□□ -1.35
LRRC28-203ENST00000447360 BCKDKO14874 412 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 OR1I1O60431 355 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 PDE9AO76083 593 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 TJP3O95049 919 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 GOSR1O95249 250 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 NSA2O95478 260 aaKnown RBP6.63□□□□□ -1.35
LRRC28-203ENST00000447360 METTL18O95568 372 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 GLI4P10075 376 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 IL10P22301 178 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 AOAHP28039 575 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 PSMB4P28070 264 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 FOXN2P32314 431 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 RFC3P40938 356 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 XCR1P46094 333 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 ITGA8P53708 1063 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 GDF10P55107 478 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 MLF1P58340 268 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 SLC26A5P58743 744 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 DCAF7P61962 342 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 MPP1Q00013 466 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 ACTN3Q08043 901 aaPredicted RBP6.63□□□□□ -1.35
LRRC28-203ENST00000447360 USP10Q14694 798 aaKnown RBP6.63□□□□□ -1.35
LRRC28-203ENST00000447360 ABRAXAS2Q15018 415 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 PCBP2Q15366 365 aaKnown RBP eCLIP6.63□□□□□ -1.35
LRRC28-203ENST00000447360 LINC01559Q495D7 138 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 SFT2D3Q587I9 215 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 CCDC181Q5TID7 509 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 DARS2Q6PI48 645 aaKnown RBP6.63□□□□□ -1.35
LRRC28-203ENST00000447360 MICALCLQ6ZW33 695 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 SYCE1Q8N0S2 351 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 PLPP5Q8NEB5 264 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 OR52N2Q8NGI0 321 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 OR9A4Q8NGU2 314 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 OR51Q1Q8NH59 317 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 GSDMBQ8TAX9 411 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 SLC35B2Q8TB61 432 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 FBF1Q8TES7 1133 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 LRRC46Q96FV0 321 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 SPATA13Q96N96 652 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 ACAT2Q9BWD1 397 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 SYNPO2LQ9H987 977 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 MRPS30Q9NP92 439 aaKnown RBP6.63□□□□□ -1.35
LRRC28-203ENST00000447360 PNPLA3Q9NST1 481 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 SPATA7Q9P0W8 599 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 B4GALT7Q9UBV7 327 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 Q9UFV3 132 aa6.63□□□□□ -1.35
LRRC28-203ENST00000447360 ADAM21Q9UKJ8 722 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms