RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 DDI2Q5TDH0 399 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 CLEC6AQ6EIG7 209 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 ALG1LQ6GMV1 187 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 OR52E8Q6IFG1 317 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 KCTD8Q6ZWB6 473 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 ARMCX6Q7L4S7 300 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 CPXM2Q8N436 756 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 OR13C4Q8NGS5 318 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 MCFD2Q8NI22 146 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 PHOSPHO1Q8TCT1 267 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 IMP4Q96G21 291 aaKnown RBP8.28□□□□□ -1.08
PTPN3-204ENST00000446349 TMEM74Q96NL1 305 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 RNF39Q9H2S5 420 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 TMEM45AQ9NWC5 275 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 ABCB7O75027 752 aa8.27□□□□□ -1.08
PTPN3-204ENST00000446349 PON3Q15166 354 aa8.27□□□□□ -1.08
PTPN3-204ENST00000446349 GPR68Q15743 365 aa8.27□□□□□ -1.08
PTPN3-204ENST00000446349 PLET1Q6UQ28 207 aa8.27□□□□□ -1.08
PTPN3-204ENST00000446349 ALYREFQ86V81 257 aaKnown RBP8.27□□□□□ -1.08
PTPN3-204ENST00000446349 PIM3Q86V86 326 aa8.27□□□□□ -1.08
PTPN3-204ENST00000446349 OSTM1Q86WC4 334 aa8.27□□□□□ -1.08
PTPN3-204ENST00000446349 ZC3H3Q8IXZ2 948 aaKnown RBP8.27□□□□□ -1.08
PTPN3-204ENST00000446349 PRSS58Q8IYP2 241 aa8.27□□□□□ -1.08
PTPN3-204ENST00000446349 SCML4Q8N228 414 aa8.27□□□□□ -1.08
PTPN3-204ENST00000446349 REEP4Q9H6H4 257 aa8.27□□□□□ -1.08
PTPN3-204ENST00000446349 MCM8Q9UJA3 840 aa8.27□□□□□ -1.08
PTPN3-204ENST00000446349 A0A1W2PQU0 124 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 PCDHGA12O60330 932 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 ZNF432O94892 652 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 ICAM2P13598 275 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 PGCP20142 388 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 CCT3P49368 545 aaKnown RBP8.27□□□□□ -1.09
PTPN3-204ENST00000446349 RCAN2Q14206 197 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 ABCA11PQ4W5N1 156 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 ZNF433Q8N7K0 673 aaPredicted RBP8.27□□□□□ -1.09
PTPN3-204ENST00000446349 CEP76Q8TAP6 659 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 COL21A1Q96P44 957 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 FBRSL1Q9HCM7 1045 aaKnown RBP8.27□□□□□ -1.09
PTPN3-204ENST00000446349 GPR160Q9UJ42 338 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 FZD4Q9ULV1 537 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 WDR45Q9Y484 360 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 DNAJC25-GNG10A0A024R161 153 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 IGKV6D-21A0A0A0MT36 114 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 FHP07954 510 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 PTDSS1P48651 473 aaKnown RBP8.27□□□□□ -1.09
PTPN3-204ENST00000446349 IDH3AP50213 366 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 OR4D2P58180 307 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 TSPAN5P62079 268 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 SCN1BQ07699 218 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 TDGQ13569 410 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 TUBA3CQ13748 450 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 LIN52Q52LA3 116 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 SLC25A25Q6KCM7 469 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 REEP3Q6NUK4 255 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 NPAS3Q8IXF0 933 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 UBE2J2Q8N2K1 259 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 TOR1AIP2Q8NFQ8 470 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 COQ8BQ96D53 544 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 C11orf24Q96F05 449 aaPredicted RBP8.27□□□□□ -1.09
PTPN3-204ENST00000446349 SIX2Q9NPC8 291 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 TUBA8Q9NY65 449 aaPredicted RBP8.27□□□□□ -1.09
PTPN3-204ENST00000446349 GRIP1Q9Y3R0 1128 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 A8MU76 341 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 PHYHO14832 338 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 UGT1A9O60656 530 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 METTL18O95568 372 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 LPLP06858 475 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 C1GALT1C1LP0DN25 315 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 DBTP11182 482 aaKnown RBP8.27□□□□□ -1.09
PTPN3-204ENST00000446349 UGT1A6P19224 532 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 PVALBP20472 110 aaPredicted RBP8.27□□□□□ -1.09
PTPN3-204ENST00000446349 ACVRL1P37023 503 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 CLRN1P58418 232 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 CREB5Q02930 508 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 GRIK2Q13002 908 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 LYSMD4Q5XG99 296 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 SLC44A3Q8N4M1 653 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 OR6K6Q8NGW6 343 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 SLC17A9Q9BYT1 436 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 UGT1A7Q9HAW7 530 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 UGT1A10Q9HAW8 530 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 UGT1A8Q9HAW9 530 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 TRIM36Q9NQ86 728 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 GRHPRQ9UBQ7 328 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 SPEF1Q9Y4P9 236 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 NHSL1Q5SYE7 1610 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 KLF11O14901 512 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 OR2B3O76000 313 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 FECHP22830 423 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 MEDAGQ5VYS4 303 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 KCTD18Q6PI47 426 aaPredicted RBP8.27□□□□□ -1.09
PTPN3-204ENST00000446349 CLEC4CQ8WTT0 213 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 FGFBP2Q9BYJ0 223 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 CD248Q9HCU0 757 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 CA14Q9ULX7 337 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 COL16A1Q07092 1604 aaPredicted RBP8.27□□□□□ -1.09
PTPN3-204ENST00000446349 CBFA2T3O75081 653 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 TSC22D2O75157 780 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 C9P02748 559 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 BMP4P12644 408 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms