RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 LMNTD1Q8N9Z9 388 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 GOT1L1Q8NHS2 421 aaPredicted RBP17.14■□□□□ 0.33
CLDN9-201ENST00000445369 MAL2Q969L2 176 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 FKBP10Q96AY3 582 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 CSF3RQ99062 836 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 REEP1Q9H902 201 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 PRM3Q9NNZ6 103 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 ITM2CQ9NQX7 267 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 FAF1Q9UNN5 650 aaPredicted RBP17.14■□□□□ 0.33
CLDN9-201ENST00000445369 TLL1O43897 1013 aa17.13■□□□□ 0.33
CLDN9-201ENST00000445369 MVDP53602 400 aa17.13■□□□□ 0.33
CLDN9-201ENST00000445369 TAP2Q03519 686 aa17.13■□□□□ 0.33
CLDN9-201ENST00000445369 UBE3AQ05086 875 aa17.13■□□□□ 0.33
CLDN9-201ENST00000445369 DPTQ07507 201 aa17.13■□□□□ 0.33
CLDN9-201ENST00000445369 HNRNPA1L2Q32P51 320 aaKnown RBP17.13■□□□□ 0.33
CLDN9-201ENST00000445369 PAGE2BQ5JRK9 111 aa17.13■□□□□ 0.33
CLDN9-201ENST00000445369 FAHD1Q6P587 224 aa17.13■□□□□ 0.33
CLDN9-201ENST00000445369 SPRED2Q7Z698 418 aa17.13■□□□□ 0.33
CLDN9-201ENST00000445369 B3GNT8Q7Z7M8 397 aa17.13■□□□□ 0.33
CLDN9-201ENST00000445369 ZC3H7AQ8IWR0 971 aaKnown RBP17.13■□□□□ 0.33
CLDN9-201ENST00000445369 OR8D1Q8WZ84 308 aa17.13■□□□□ 0.33
CLDN9-201ENST00000445369 TPD52L3Q96J77 140 aa17.13■□□□□ 0.33
CLDN9-201ENST00000445369 TRIM39Q9HCM9 518 aa17.13■□□□□ 0.33
CLDN9-201ENST00000445369 THUMPD1Q9NXG2 353 aaKnown RBP17.13■□□□□ 0.33
CLDN9-201ENST00000445369 PCDHGB1Q9Y5G3 927 aa17.13■□□□□ 0.33
CLDN9-201ENST00000445369 EDDM13A0A1B0GTR0 161 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 C17orf113A0A1B0GUU1 675 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 XPNPEP2O43895 674 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 FOXD2O60548 495 aaPredicted RBP17.12■□□□□ 0.33
CLDN9-201ENST00000445369 GCM2O75603 506 aaPredicted RBP17.12■□□□□ 0.33
CLDN9-201ENST00000445369 INHBBP09529 407 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 ADRB3P13945 408 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 ZNF182P17025 639 aaPredicted RBP17.12■□□□□ 0.33
CLDN9-201ENST00000445369 JUNDP17535 347 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 IL1RL1Q01638 556 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 TSTA3Q13630 321 aaPredicted RBP17.12■□□□□ 0.33
CLDN9-201ENST00000445369 PDE7AQ13946 482 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 FNDC3BQ53EP0 1204 aaKnown RBP17.12■□□□□ 0.33
CLDN9-201ENST00000445369 LAIR1Q6GTX8 287 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 KLHL35Q6PF15 583 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 NAGSQ8N159 534 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 KIAA1958Q8N8K9 716 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 C11orf65Q8NCR3 313 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 SLC5A11Q8WWX8 675 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 SPNS1Q9H2V7 528 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 GPATCH2Q9NW75 528 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 PSME2Q9UL46 239 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 NDRG4Q9ULP0 352 aaKnown RBP17.12■□□□□ 0.33
CLDN9-201ENST00000445369 PTGES3LE9PB15 166 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 E9PQ18 207 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 PLK4O00444 970 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 SUV39H1O43463 412 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 MMP20O60882 483 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 C9P02748 559 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 NTRK1P04629 796 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 POU2F2P09086 479 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 FURINP09958 794 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 ACADLP28330 430 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 SLC6A11P48066 632 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 GP2P55259 537 aaKnown RBP17.12■□□□□ 0.33
CLDN9-201ENST00000445369 CXCR4P61073 352 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 HBA1P69905 142 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 BNIP3Q12983 259 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 PPIGQ13427 754 aaKnown RBP eCLIP17.12■□□□□ 0.33
CLDN9-201ENST00000445369 TEAD4Q15561 434 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 GAB4Q2WGN9 574 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 SLC16A12Q6ZSM3 486 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 TRMT11Q7Z4G4 463 aaKnown RBP17.12■□□□□ 0.33
CLDN9-201ENST00000445369 TTC29Q8NA56 475 aaPredicted RBP17.12■□□□□ 0.33
CLDN9-201ENST00000445369 OR4K1Q8NGD4 311 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 ZNF514Q96K75 400 aaPredicted RBP17.12■□□□□ 0.33
CLDN9-201ENST00000445369 EPYCQ99645 322 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 FUNDC2Q9BWH2 189 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 DGCR6LQ9BY27 220 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 DPEP2Q9H4A9 486 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 ADPRHL2Q9NX46 363 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 PADI2Q9Y2J8 665 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 GMPPBQ9Y5P6 360 aa17.12■□□□□ 0.33
CLDN9-201ENST00000445369 KLHL18O94889 574 aa17.11■□□□□ 0.33
CLDN9-201ENST00000445369 TGFB1P01137 390 aa17.11■□□□□ 0.33
CLDN9-201ENST00000445369 GBAP04062 536 aa17.11■□□□□ 0.33
CLDN9-201ENST00000445369 HTR1BP28222 390 aa17.11■□□□□ 0.33
CLDN9-201ENST00000445369 AQP1P29972 269 aa17.11■□□□□ 0.33
CLDN9-201ENST00000445369 VIPR2P41587 438 aa17.11■□□□□ 0.33
CLDN9-201ENST00000445369 NFE2L1Q14494 772 aa17.11■□□□□ 0.33
CLDN9-201ENST00000445369 ELAVL3Q14576 367 aaKnown RBP17.11■□□□□ 0.33
CLDN9-201ENST00000445369 NXPE4Q6UWF7 544 aa17.11■□□□□ 0.33
CLDN9-201ENST00000445369 ZNF852Q6ZMS4 543 aa17.11■□□□□ 0.33
CLDN9-201ENST00000445369 WDR48Q8TAF3 677 aa17.11■□□□□ 0.33
CLDN9-201ENST00000445369 FAM81AQ8TBF8 368 aa17.11■□□□□ 0.33
CLDN9-201ENST00000445369 PITX2Q99697 317 aa17.11■□□□□ 0.33
CLDN9-201ENST00000445369 APOL4Q9BPW4 351 aa17.11■□□□□ 0.33
CLDN9-201ENST00000445369 DOHHQ9BU89 302 aa17.11■□□□□ 0.33
CLDN9-201ENST00000445369 PREBQ9HCU5 417 aa17.11■□□□□ 0.33
CLDN9-201ENST00000445369 MYNNQ9NPC7 610 aa17.11■□□□□ 0.33
CLDN9-201ENST00000445369 CCDC177Q9NQR7 707 aaPredicted RBP17.11■□□□□ 0.33
CLDN9-201ENST00000445369 KRT84Q9NSB2 600 aa17.11■□□□□ 0.33
CLDN9-201ENST00000445369 ATAD3AQ9NVI7 634 aa17.11■□□□□ 0.33
CLDN9-201ENST00000445369 KIF17Q9P2E2 1029 aa17.11■□□□□ 0.33
CLDN9-201ENST00000445369 LZTS3O60299 673 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms