RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 C14orf105Q9NVL8 296 aa14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 TMEM216Q9P0N5 145 aa14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 PTRH2Q9Y3E5 179 aaKnown RBP14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 ANGPTL3Q9Y5C1 460 aa14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 MAU2Q9Y6X3 613 aa14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 CFAP47Q6ZTR5 3102 aa14.28□□□□□ -0.12
CSNK1E-210ENST00000442216 A0A0A6YYC8 382 aaPredicted RBP14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 A0A1W2PPM1 405 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 ANKDD1BA6NHY2 528 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 I3L1I5 382 aaPredicted RBP14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 E2F3O00716 465 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 ATXN7O15265 892 aaPredicted RBP14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 GLRA3O75311 464 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 CLEC3AO75596 197 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 FURINP09958 794 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 SBK3P0C264 359 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 ALOX12P18054 663 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 SERPINB1P30740 379 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 HNF4AP41235 474 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 CCR10P46092 362 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 SLCO1A2P46721 670 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 CCT5P48643 541 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 IFFO1Q0D2I5 559 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 GTF2H2Q13888 395 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 LINC00303Q3SY05 128 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 LIPJQ5W064 366 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 GTF2H2CQ6P1K8 395 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 ABHD13Q7L211 337 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 CYP4X1Q8N118 509 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 DTWD1Q8N5C7 304 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 METTL27Q8N6F8 245 aaPredicted RBP14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 AMER3Q8N944 861 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 STT3BQ8TCJ2 826 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 CREB3L4Q8TEY5 395 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 APOBEC4Q8WW27 367 aaKnown RBP14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 MACROD1Q9BQ69 325 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 TMEM109Q9BVC6 243 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 C1QTNF3Q9BXJ4 246 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 ADGRE2Q9UHX3 823 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 ZNF490Q9ULM2 529 aaPredicted RBP14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 MRPS2Q9Y399 296 aaKnown RBP14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 TSC22D4Q9Y3Q8 395 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 KCNMB2Q9Y691 235 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 FAM208BQ5VWN6 2430 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 ITPR1Q14643 2758 aa14.27□□□□□ -0.13
CSNK1E-210ENST00000442216 MED13Q9UHV7 2174 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 GOLGA8RI6L899 631 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 PCDH17O14917 1159 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 STATHP02808 62 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 SERPIND1P05546 499 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 CYC1P08574 325 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 ZGLP1P0C6A0 271 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 SMIM10L1P0DMW3 83 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 SFTPCP11686 197 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 CD22P20273 847 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 IL10P22301 178 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 EEF1DP29692 281 aaKnown RBP14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 STXBP1P61764 594 aaKnown RBP14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 HYAL2Q12891 473 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 DEFB109BQ30KR1 87 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 ATP1A1-AS1Q5TC04 95 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 GRHL2Q6ISB3 625 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 MED27Q6P2C8 311 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 GOLGA7Q7Z5G4 137 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 SLC22A9Q8IVM8 553 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 APLFQ8IW19 511 aaPredicted RBP14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 LAS2Q8IYD9 372 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 OR9A4Q8NGU2 314 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 UTP15Q8TED0 518 aaKnown RBP14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 EXTL1Q92935 676 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 MIEF2Q96C03 454 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 PHF21BQ96EK2 531 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 MOCOSQ96EN8 888 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 SMIM10Q96HG1 83 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 VPS50Q96JG6 964 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 ARHGAP9Q9BRR9 750 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 ADNPQ9H2P0 1102 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 SEMA3GQ9NS98 782 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 TRPC4Q9UBN4 977 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 CTSFQ9UBX1 484 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 LGALS13Q9UHV8 139 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 TUBD1Q9UJT1 453 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 GRID1Q9ULK0 1009 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 MAN2B2Q9Y2E5 1009 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 LAMA5O15230 3695 aa14.26□□□□□ -0.13
CSNK1E-210ENST00000442216 MGAQ8IWI9 3026 aa14.25□□□□□ -0.13
CSNK1E-210ENST00000442216 TLDC2A0PJX2 215 aa14.25□□□□□ -0.13
CSNK1E-210ENST00000442216 SMIM23A6NLE4 172 aa14.25□□□□□ -0.13
CSNK1E-210ENST00000442216 A8MT66 165 aa14.25□□□□□ -0.13
CSNK1E-210ENST00000442216 GALR3O60755 368 aaPredicted RBP14.25□□□□□ -0.13
CSNK1E-210ENST00000442216 KLHL18O94889 574 aa14.25□□□□□ -0.13
CSNK1E-210ENST00000442216 SIX3O95343 332 aaPredicted RBP14.25□□□□□ -0.13
CSNK1E-210ENST00000442216 UMODP07911 640 aa14.25□□□□□ -0.13
CSNK1E-210ENST00000442216 RPS17P08708 135 aaKnown RBP14.25□□□□□ -0.13
CSNK1E-210ENST00000442216 IL1RNP18510 177 aa14.25□□□□□ -0.13
CSNK1E-210ENST00000442216 MMP11P24347 488 aa14.25□□□□□ -0.13
CSNK1E-210ENST00000442216 CRHR1P34998 444 aa14.25□□□□□ -0.13
CSNK1E-210ENST00000442216 SLC18A2Q05940 514 aa14.25□□□□□ -0.13
CSNK1E-210ENST00000442216 ADPRMQ3LIE5 342 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms