RNA–Protein interactions for RNA: ENST00000440289.6

PTPRJ-202, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 1 (best) BASIC

Gene PTPRJ, Length 3,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-202ENST00000440289 SYNDIG1LA6NDD5 238 aa17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 MANSC4A6NHS7 340 aaPredicted RBP17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 ACLYP53396 1101 aa17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 B4GALNT1Q00973 533 aa17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 PROX2Q3B8N5 592 aa17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 ALG1LQ6GMV1 187 aa17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 TNFAIP8L2Q6P589 184 aaPredicted RBP17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 PTCHD4Q6ZW05 846 aa17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 CALHM3Q86XJ0 350 aa17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 BBS7Q8IWZ6 715 aa17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 VMP1Q96GC9 406 aa17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 SAMD11Q96NU1 681 aa17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 NECTIN4Q96NY8 510 aa17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 NEDD4LQ96PU5 975 aa17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 NEK6Q9HC98 313 aa17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 STARD7Q9NQZ5 370 aa17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 LRRTM2O43300 516 aa17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 NDUFB5O43674 189 aa17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 EOMESO95936 686 aa17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 CD22P20273 847 aa17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 PRPS1L1P21108 318 aa17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 LHCGRP22888 699 aa17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 PTPN6P29350 595 aa17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 GZMMP51124 257 aa17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 RPS13P62277 151 aaKnown RBP17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 CSTF3Q12996 717 aaKnown RBP17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 VEPH1Q14D04 833 aa17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 ARMC4Q5T2S8 1044 aa17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 VPS37AQ8NEZ2 397 aa17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 PHF10Q8WUB8 498 aaKnown RBP17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 CCNB1IP1Q9NPC3 277 aa17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 CFAP97Q9P2B7 532 aa17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 ABT1Q9ULW3 272 aaKnown RBP17.6■□□□□ 0.41
PTPRJ-202ENST00000440289 MYO10Q9HD67 2058 aa17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 KNL1Q8NG31 2342 aa17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 A0A0G2JN53 185 aa17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 IDH3BO43837 385 aa17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 CYP2A7P20853 494 aa17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 RACK1P63244 317 aaKnown RBP17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 RPS26P11Q5JNZ5 115 aaPredicted RBP17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 CHST14Q8NCH0 376 aa17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 MYDGFQ969H8 173 aa17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 HTATIP2Q9BUP3 242 aa17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 LINC00597Q9H2U6 94 aa17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 TOR4AQ9NXH8 423 aa17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 IGSF6O95976 241 aa17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 ADORA3P0DMS8 318 aa17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 LMAN2Q12907 356 aa17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 EIF3MQ7L2H7 374 aaKnown RBP17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 DNAJB7Q7Z6W7 309 aaPredicted RBP17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 TRIM48Q8IWZ4 208 aa17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 CAMKK1Q8N5S9 505 aa17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 AQP11Q8NBQ7 271 aa17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 B3GNT7Q8NFL0 401 aa17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 B4GALT6Q9UBX8 382 aa17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 DSCR3O14972 297 aa17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 PQBP1O60828 265 aaKnown RBP17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 TUFMP49411 452 aaKnown RBP17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 IL18R1Q13478 541 aa17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 KEAP1Q14145 624 aa17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 BCL7AQ4VC05 210 aa17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 RNF130Q86XS8 419 aa17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 RAB8BQ92930 207 aa17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 CMTM7Q96FZ5 175 aa17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 PDLIM5Q96HC4 596 aaKnown RBP17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 NRTNQ99748 197 aa17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 MMP28Q9H239 520 aa17.59■□□□□ 0.41
PTPRJ-202ENST00000440289 EFCAB10A6NFE3 127 aa17.58■□□□□ 0.4
PTPRJ-202ENST00000440289 SERPIND1P05546 499 aa17.58■□□□□ 0.4
PTPRJ-202ENST00000440289 PIK3CBP42338 1070 aa17.58■□□□□ 0.4
PTPRJ-202ENST00000440289 CSNK1DP48730 415 aa17.58■□□□□ 0.4
PTPRJ-202ENST00000440289 RNF180Q86T96 592 aa17.58■□□□□ 0.4
PTPRJ-202ENST00000440289 DTX3Q8N9I9 347 aa17.58■□□□□ 0.4
PTPRJ-202ENST00000440289 OTULINQ96BN8 352 aa17.58■□□□□ 0.4
PTPRJ-202ENST00000440289 TRNT1Q96Q11 434 aaKnown RBP17.58■□□□□ 0.4
PTPRJ-202ENST00000440289 FAM129BQ96TA1 746 aa17.58■□□□□ 0.4
PTPRJ-202ENST00000440289 SLC35A5Q9BS91 424 aa17.58■□□□□ 0.4
PTPRJ-202ENST00000440289 CDADC1Q9BWV3 514 aa17.58■□□□□ 0.4
PTPRJ-202ENST00000440289 RNF186Q9NXI6 227 aa17.58■□□□□ 0.4
PTPRJ-202ENST00000440289 SNX4O95219 450 aa17.58■□□□□ 0.4
PTPRJ-202ENST00000440289 TNNI3P19429 210 aa17.58■□□□□ 0.4
PTPRJ-202ENST00000440289 XPAP23025 273 aaPredicted RBP17.58■□□□□ 0.4
PTPRJ-202ENST00000440289 GABRR2P28476 465 aa17.58■□□□□ 0.4
PTPRJ-202ENST00000440289 ETV3P41162 512 aa17.58■□□□□ 0.4
PTPRJ-202ENST00000440289 DBPQ10586 325 aaPredicted RBP17.58■□□□□ 0.4
PTPRJ-202ENST00000440289 LRIT3Q3SXY7 679 aa17.58■□□□□ 0.4
PTPRJ-202ENST00000440289 LRIF1Q5T3J3 769 aa17.58■□□□□ 0.4
PTPRJ-202ENST00000440289 NXNL2Q5VZ03 156 aa17.58■□□□□ 0.4
PTPRJ-202ENST00000440289 DEF8Q6ZN54 512 aa17.58■□□□□ 0.4
PTPRJ-202ENST00000440289 DPY19L3Q6ZPD9 716 aa17.58■□□□□ 0.4
PTPRJ-202ENST00000440289 GDPD3Q7L5L3 318 aa17.58■□□□□ 0.4
PTPRJ-202ENST00000440289 THOC6Q86W42 341 aaKnown RBP17.58■□□□□ 0.4
PTPRJ-202ENST00000440289 PCDHGB3Q9Y5G1 929 aa17.58■□□□□ 0.4
PTPRJ-202ENST00000440289 GRXCR2A6NFK2 248 aa17.57■□□□□ 0.4
PTPRJ-202ENST00000440289 METTL15A6NJ78 407 aa17.57■□□□□ 0.4
PTPRJ-202ENST00000440289 H7C0S8 307 aa17.57■□□□□ 0.4
PTPRJ-202ENST00000440289 SLC16A8O95907 504 aa17.57■□□□□ 0.4
PTPRJ-202ENST00000440289 OR2B6P58173 313 aa17.57■□□□□ 0.4
PTPRJ-202ENST00000440289 KCNC4Q03721 635 aa17.57■□□□□ 0.4
PTPRJ-202ENST00000440289 TCEA2Q15560 299 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms