RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 MPPE1Q53F39 396 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 C22orf39Q6P5X5 142 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 FAM124AQ86V42 546 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 PLD3Q8IV08 490 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 METTL2AQ96IZ6 378 aaKnown RBP15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 TPD52L3Q96J77 140 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 DUSP26Q9BV47 211 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 PCDH12Q9NPG4 1184 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 ASAH2Q9NR71 780 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 FZD4Q9ULV1 537 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 CORO2BQ9UQ03 480 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 RNF6Q9Y252 685 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 PADI2Q9Y2J8 665 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 YBX2Q9Y2T7 364 aaKnown RBP15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 REV3LO60673 3130 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 CXorf51AA0A1B0GTR3 108 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 EFCAB9A8MZ26 197 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 KPNA5O15131 536 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 CKMP06732 381 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 PPIBP23284 216 aaKnown RBP15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 UGT2B10P36537 528 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 ACSM2AQ08AH3 577 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 TBCEQ15813 527 aaPredicted RBP15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 CATSPEREQ5SY80 951 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 ACSM2BQ68CK6 577 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 CAMKMTQ7Z624 323 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 BBS7Q8IWZ6 715 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 ZHX1-C8orf76Q96EF9 292 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 LMLNQ96KR4 655 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 PLCXD1Q9NUJ7 323 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 ADPRHL2Q9NX46 363 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 WDR37Q9Y2I8 494 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 PCDHGB3Q9Y5G1 929 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 NOTCH4Q99466 2003 aa15.8■□□□□ 0.12
CLCNKA-203ENST00000439316 SUV39H1O43463 412 aa15.79■□□□□ 0.12
CLCNKA-203ENST00000439316 CNOT3O75175 753 aaKnown RBP15.79■□□□□ 0.12
CLCNKA-203ENST00000439316 ABCB1P08183 1280 aaPredicted RBP15.79■□□□□ 0.12
CLCNKA-203ENST00000439316 HSD3B1P14060 373 aa15.79■□□□□ 0.12
CLCNKA-203ENST00000439316 HSD3B2P26439 372 aa15.79■□□□□ 0.12
CLCNKA-203ENST00000439316 CD40LGP29965 261 aa15.79■□□□□ 0.12
CLCNKA-203ENST00000439316 TGFBR1P36897 503 aa15.79■□□□□ 0.12
CLCNKA-203ENST00000439316 EIF2DP41214 584 aaKnown RBP15.79■□□□□ 0.12
CLCNKA-203ENST00000439316 CCR2P41597 374 aa15.79■□□□□ 0.12
CLCNKA-203ENST00000439316 EIF2B2P49770 351 aaKnown RBP15.79■□□□□ 0.12
CLCNKA-203ENST00000439316 RAE1P78406 368 aaKnown RBP15.79■□□□□ 0.12
CLCNKA-203ENST00000439316 GAB1Q13480 694 aa15.79■□□□□ 0.12
CLCNKA-203ENST00000439316 GPM6BQ13491 265 aa15.79■□□□□ 0.12
CLCNKA-203ENST00000439316 INAVAQ3KP66 663 aa15.79■□□□□ 0.12
CLCNKA-203ENST00000439316 XKR6Q5GH73 641 aa15.79■□□□□ 0.12
CLCNKA-203ENST00000439316 MLIPQ5VWP3 458 aa15.79■□□□□ 0.12
CLCNKA-203ENST00000439316 HTR3DQ70Z44 454 aa15.79■□□□□ 0.12
CLCNKA-203ENST00000439316 PAGE2Q7Z2X7 111 aa15.79■□□□□ 0.12
CLCNKA-203ENST00000439316 TSEN54Q7Z6J9 526 aaKnown RBP15.79■□□□□ 0.12
CLCNKA-203ENST00000439316 RHOXF1Q8NHV9 184 aa15.79■□□□□ 0.12
CLCNKA-203ENST00000439316 CDC26Q8NHZ8 85 aa15.79■□□□□ 0.12
CLCNKA-203ENST00000439316 MTERF1Q99551 399 aaKnown RBP15.79■□□□□ 0.12
CLCNKA-203ENST00000439316 COPS4Q9BT78 406 aa15.79■□□□□ 0.12
CLCNKA-203ENST00000439316 CPEB1Q9BZB8 566 aaKnown RBP15.79■□□□□ 0.12
CLCNKA-203ENST00000439316 B4GALT6Q9UBX8 382 aa15.79■□□□□ 0.12
CLCNKA-203ENST00000439316 PSORS1C1Q9UIG5 152 aa15.79■□□□□ 0.12
CLCNKA-203ENST00000439316 HS3ST2Q9Y278 367 aa15.79■□□□□ 0.12
CLCNKA-203ENST00000439316 E7EQ34 232 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 H0YIV9 168 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 SGTAO43765 313 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 MYO1DO94832 1006 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 GSTM1P09488 218 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 RRM2P31350 389 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 GGT2P36268 569 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 LIPAP38571 399 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 ASMTP46597 345 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 PPP5CP53041 499 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 ERVK-21P61565 698 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 TUBA1BP68363 451 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 ELP6Q0PNE2 266 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 DNASE1L3Q13609 305 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 DOC2AQ14183 400 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 RGNQ15493 299 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 GRHL2Q6ISB3 625 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 TUBA1AQ71U36 451 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 THOC6Q86W42 341 aaKnown RBP15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 NPAS3Q8IXF0 933 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 ABHD8Q96I13 439 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 DACH2Q96NX9 599 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 DOHHQ9BU89 302 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 DCSTAMPQ9H295 470 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 BRD9Q9H8M2 597 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 FKBP14Q9NWM8 211 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 CFAP97Q9P2B7 532 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 CD84Q9UIB8 345 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 LYVE1Q9Y5Y7 322 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 NUP214P35658 2090 aaPredicted RBP15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 PRRC2BQ5JSZ5 2229 aaKnown RBP15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 CCDC85CA6NKD9 419 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 ARHGEF33A8MVX0 844 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 M0R082 166 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 BNIP3LO60238 219 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 GCM2O75603 506 aaPredicted RBP15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 DDX39BQ13838 428 aaKnown RBP15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 SF1Q15637 639 aaKnown RBP15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms