RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 PLPP6Q8IY26 295 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 NAGSQ8N159 534 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 FCGR1BQ92637 280 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 FRMD6Q96NE9 622 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 TCF25Q9BQ70 676 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 TM6SF2Q9BZW4 377 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 SLA2Q9H6Q3 261 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 HHATLQ9HCP6 504 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 EVA1BQ9NVM1 165 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 FZD4Q9ULV1 537 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 NOD1Q9Y239 953 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 HSPE1-MOB4S4R3N1 261 aa12.91□□□□□ -0.34
ACTN1-204ENST00000438964 CKAP5Q14008 2032 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 A0A0G2JLL6 359 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-204ENST00000438964 TNFRSF10BO14763 440 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 NOS1APO75052 506 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-204ENST00000438964 OR2B3O76000 313 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 ZNF250P15622 560 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 ENPP1P22413 925 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 EVI2BP34910 448 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 CNR2P34972 360 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 VN1R5Q7Z5H4 357 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 PRRT2Q7Z6L0 340 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-204ENST00000438964 SYT12Q8IV01 421 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 LMNTD1Q8N9Z9 388 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 GPR156Q8NFN8 814 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 C7orf34Q96L11 122 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 OPALINQ96PE5 141 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 ALG5Q9Y673 324 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 ZSWIM8A7E2V4 1837 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 GRXCR2A6NFK2 248 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 MAGEB17A8MXT2 336 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 NT5C1B-RDH14C9J2C7 533 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 BNIP3LO60238 219 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 PRAMEF11O60813 436 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 PSIP1O75475 530 aaKnown RBP12.9□□□□□ -0.34
ACTN1-204ENST00000438964 NCR1O76036 304 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 TIE1P35590 1138 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 ITGA1P56199 1179 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 PTGES3Q15185 160 aaKnown RBP12.9□□□□□ -0.34
ACTN1-204ENST00000438964 PCBP2Q15366 365 aaKnown RBP eCLIP12.9□□□□□ -0.342e-6■■■□□ 17.9
ACTN1-204ENST00000438964 COX20Q5RI15 118 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 FAM171BQ6P995 826 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 ADAMTSL2Q86TH1 951 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 KCNJ9Q92806 393 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 TRIM63Q969Q1 353 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 PITX2Q99697 317 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 GPR63Q9BZJ6 419 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 CD244Q9BZW8 370 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 CRISPLD1Q9H336 500 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 OLA1Q9NTK5 396 aaKnown RBP12.9□□□□□ -0.34
ACTN1-204ENST00000438964 ARL15Q9NXU5 204 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 MARCH2Q9P0N8 246 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 NDRG2Q9UN36 371 aaKnown RBP12.9□□□□□ -0.34
ACTN1-204ENST00000438964 ERVW-1Q9UQF0 538 aa12.9□□□□□ -0.34
ACTN1-204ENST00000438964 PRG3Q9Y2Y8 225 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-204ENST00000438964 RALGAPA2Q2PPJ7 1873 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 GBF1Q92538 1859 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 MN1Q10571 1320 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-204ENST00000438964 PRAMEF25A6NGN4 478 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 PLA2G10O15496 165 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 ENTPD6O75354 484 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 HOXB8P17481 243 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-204ENST00000438964 RPS3P23396 243 aaKnown RBP eCLIP12.89□□□□□ -0.356e-7■■□□□ 13.4
ACTN1-204ENST00000438964 SGSHP51688 502 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 RUNX1T1Q06455 604 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 SCN1BQ07699 218 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 NFE2Q16621 373 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-204ENST00000438964 ZXDCQ2QGD7 858 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-204ENST00000438964 TOR2AQ5JU69 321 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 SAXO2Q658L1 398 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 HMGN2P46Q86SG4 172 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 SERPINA9Q86WD7 417 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 DENND1CQ8IV53 801 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 OR4K1Q8NGD4 311 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 GRPEL2Q8TAA5 225 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 RNF121Q9H920 327 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 TPT1P8Q9HAU6 139 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 NDUFAF4Q9P032 175 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 GREB1Q4ZG55 1949 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 SLC35F4A4IF30 521 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 SLC28A1O00337 649 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 ETFAP13804 333 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 ATN1P54259 1190 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-204ENST00000438964 LRRC32Q14392 662 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 ZNF267Q14586 743 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-204ENST00000438964 P2RY14Q15391 338 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 TAF1AQ15573 450 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-204ENST00000438964 DUSP7Q16829 419 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 C5orf22Q49AR2 442 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 FAM205BPQ63HN1 556 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 IQCF2Q8IXL9 164 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 ACBD6Q9BR61 282 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 C1QTNF6Q9BXI9 259 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 FAM126AQ9BYI3 521 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-204ENST00000438964 SLC22A4Q9H015 551 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 RPS6KA6Q9UK32 745 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 TLR6Q9Y2C9 796 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 PCDHGA2Q9Y5H1 932 aa12.89□□□□□ -0.35
ACTN1-204ENST00000438964 TNPO3Q9Y5L0 923 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms