RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 PPP1R3CQ9UQK1 317 aa3.19□□□□□ -1.9
TRAPPC13-204ENST00000438419 EXOGQ9Y2C4 368 aaKnown RBP3.19□□□□□ -1.9
TRAPPC13-204ENST00000438419 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 SNED1Q8TER0 1413 aa3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 A0A087WUV0 522 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 A0A0A6YYC8 382 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 SDR42E2A6NKP2 422 aa3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 I3L1I5 382 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 C8orf89P0DMQ9 161 aa3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 DLATP10515 647 aaKnown RBP3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 CTNNB1P35222 781 aa3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 ATP6V1E1P36543 226 aa3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 VEGFCP49767 419 aa3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 IRX1P78414 480 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 AP1B1Q10567 949 aa3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 EFTUD2Q15029 972 aaKnown RBP eCLIP3.18□□□□□ -1.91e-6■■■■■ 35.8
TRAPPC13-204ENST00000438419 EXT1Q16394 746 aa3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 TRIM65Q6PJ69 517 aa3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 NHLRC1Q6VVB1 395 aa3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 PTAR1Q7Z6K3 402 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 ANKRD46Q86W74 232 aa3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 MEX3DQ86XN8 651 aaKnown RBP3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 CCDC60Q8IWA6 550 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 RCOR2Q8IZ40 523 aa3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 LRTM2Q8N967 370 aa3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 OR6S1Q8NH40 331 aa3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 AP2M1Q96CW1 435 aa3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 CABS1Q96KC9 395 aa3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 NECTIN4Q96NY8 510 aa3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 BTBD9Q96Q07 612 aa3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 CDCA3Q99618 268 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 ATG101Q9BSB4 218 aa3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 ACAT2Q9BWD1 397 aa3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 KRTAP4-3Q9BYR4 195 aa3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 CUEDC2Q9H467 287 aa3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 SLCO1C1Q9NYB5 712 aa3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 TRPC4Q9UBN4 977 aa3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 NOCTQ9UK39 431 aaKnown RBP3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 GPR132Q9UNW8 380 aa3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 KLK4Q9Y5K2 254 aa3.18□□□□□ -1.9
TRAPPC13-204ENST00000438419 TRAV18A0A075B6X5 111 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 A0A0U1RQG5 324 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 SNURFLB1AK76 121 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 E5RGE8 158 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 H3BMM5 538 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 KINO60870 393 aaKnown RBP3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 KERAO60938 352 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 RAD51DO75771 328 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 GLCEO94923 617 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 BAG2O95816 211 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 SBK2P0C263 348 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 RPL35AP18077 110 aaKnown RBP3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 CYP2A7P20853 494 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 HLA-FP30511 346 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 DUTP33316 252 aaKnown RBP3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 LUMP51884 338 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 ACTN3Q08043 901 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 TEFQ10587 303 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 ABRQ12979 859 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 FAAP20Q6NZ36 180 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 ARL10Q8N8L6 244 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 OR4C15Q8NGM1 316 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 ST7LQ8TDW4 575 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 SNX21Q969T3 373 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 POM121L2Q96KW2 1035 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 LINC00479Q96M42 142 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 USP28Q96RU2 1077 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 ZNF559Q9BR84 538 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 TRIM51Q9BSJ1 452 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 MCRIP2Q9BUT9 160 aaKnown RBP3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 TDRD1Q9BXT4 1180 aaKnown RBP3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 DGCR6LQ9BY27 220 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 GFRA4Q9GZZ7 299 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 DBNDD1Q9H9R9 158 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 TMOD3Q9NYL9 352 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 IL36AQ9UHA7 158 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 PRDM4Q9UKN5 801 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 ELF5Q9UKW6 265 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 STX8Q9UNK0 236 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 PA2G4Q9UQ80 394 aaKnown RBP3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 NSG2Q9Y328 171 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 SELENOKQ9Y6D0 94 aa3.17□□□□□ -1.9
TRAPPC13-204ENST00000438419 MYH15Q9Y2K3 1946 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 IGLV7-46A0A075B6I9 117 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 C13orf42A0A1B0GVH6 325 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 ILVBLA1L0T0 632 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 NDUFAF8A1L188 74 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 MAGEC1O60732 1142 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 ATP9AO75110 1047 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 RTN2O75298 545 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 SERPINB2P05120 415 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 ZNF883P0CG24 379 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 ELAVL4P26378 380 aaKnown RBP3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 MMP12P39900 470 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 MAGEB1P43366 347 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 TSFMP43897 325 aaKnown RBP3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 OR3A1P47881 315 aa3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 CLK1P49759 484 aaKnown RBP3.16□□□□□ -1.9
TRAPPC13-204ENST00000438419 HUNKP57058 714 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms