RNA–Protein interactions for RNA: ENST00000437196.1

EXT1-203, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 5

Gene EXT1, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-203ENST00000437196 SCRG1O75711 98 aa12.86□□□□□ -0.35
EXT1-203ENST00000437196 MDH1P40925 334 aaKnown RBP12.86□□□□□ -0.35
EXT1-203ENST00000437196 CCR10P46092 362 aa12.86□□□□□ -0.35
EXT1-203ENST00000437196 ARFIP1P53367 373 aa12.86□□□□□ -0.35
EXT1-203ENST00000437196 CYP4F2P78329 520 aa12.86□□□□□ -0.35
EXT1-203ENST00000437196 CSTF3Q12996 717 aaKnown RBP12.86□□□□□ -0.35
EXT1-203ENST00000437196 DDX39BQ13838 428 aaKnown RBP12.86□□□□□ -0.35
EXT1-203ENST00000437196 MUM1Q2TAK8 710 aa12.86□□□□□ -0.35
EXT1-203ENST00000437196 PRTGQ2VWP7 1150 aa12.86□□□□□ -0.35
EXT1-203ENST00000437196 TUBB8Q3ZCM7 444 aa12.86□□□□□ -0.35
EXT1-203ENST00000437196 RNF165Q6ZSG1 346 aa12.86□□□□□ -0.35
EXT1-203ENST00000437196 VN1R4Q7Z5H5 301 aa12.86□□□□□ -0.35
EXT1-203ENST00000437196 OR4N4Q8N0Y3 316 aa12.86□□□□□ -0.35
EXT1-203ENST00000437196 ZNF473Q8WTR7 871 aaKnown RBP12.86□□□□□ -0.35
EXT1-203ENST00000437196 MVB12AQ96EY5 273 aa12.86□□□□□ -0.35
EXT1-203ENST00000437196 C7orf26Q96N11 449 aa12.86□□□□□ -0.35
EXT1-203ENST00000437196 SERPINI1Q99574 410 aa12.86□□□□□ -0.35
EXT1-203ENST00000437196 SHCBP1LQ9BZQ2 653 aa12.86□□□□□ -0.35
EXT1-203ENST00000437196 AHSPQ9NZD4 102 aa12.86□□□□□ -0.35
EXT1-203ENST00000437196 A0A1B0GTL3 188 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 HYKKA2RU49 373 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 AGRPO00253 132 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 ITM2AO43736 263 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 CPNE3O75131 537 aaKnown RBP12.85□□□□□ -0.35
EXT1-203ENST00000437196 LYPLA1O75608 230 aaPredicted RBP12.85□□□□□ -0.35
EXT1-203ENST00000437196 TNFSF15O95150 251 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 ITIH1P19827 911 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 CD82P27701 267 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 TSFMP43897 325 aaKnown RBP12.85□□□□□ -0.35
EXT1-203ENST00000437196 GABREP78334 506 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 OCRLQ01968 901 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 CUL3Q13618 768 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 FAM53BQ14153 422 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 HERC3Q15034 1050 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 KANK2Q63ZY3 851 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 TRIM40Q6P9F5 258 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 CREB3L4Q8TEY5 395 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 USP7Q93009 1102 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 GAL3ST3Q96A11 431 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 NXPE2Q96DL1 559 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 MTERF1Q99551 399 aaKnown RBP12.85□□□□□ -0.35
EXT1-203ENST00000437196 SLC6A16Q9GZN6 736 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 ROGDIQ9GZN7 287 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 REXO4Q9GZR2 422 aaKnown RBP12.85□□□□□ -0.35
EXT1-203ENST00000437196 CCDC134Q9H6E4 229 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 DMRT3Q9NQL9 472 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 TXLNGQ9NUQ3 528 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 VTI1BQ9UEU0 232 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 ZDHHC2Q9UIJ5 367 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 CDC14AQ9UNH5 594 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 RUVBL1Q9Y265 456 aaKnown RBP12.85□□□□□ -0.35
EXT1-203ENST00000437196 NEUROG3Q9Y4Z2 214 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 TIMM22Q9Y584 194 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 PCDHGA7Q9Y5G6 932 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 SLC22A7Q9Y694 548 aa12.85□□□□□ -0.35
EXT1-203ENST00000437196 LRIT2A6NDA9 550 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 MAGEB17A8MXT2 336 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 H3BMH7 237 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 SLC28A1O00337 649 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 NVLO15381 856 aaKnown RBP12.84□□□□□ -0.35
EXT1-203ENST00000437196 ZNF749O43361 778 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 RGS14O43566 566 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 HCRTR1O43613 425 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 PDYNP01213 254 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 RTP5Q14D33 572 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 IMPG1Q17R60 797 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 HKDC1Q2TB90 917 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 DEPDC1Q5TB30 811 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 KHDRBS2Q5VWX1 349 aaKnown RBP12.84□□□□□ -0.35
EXT1-203ENST00000437196 CLEC6AQ6EIG7 209 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 RHBDD2Q6NTF9 364 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 PWWP2BQ6NUJ5 590 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 PRMT9Q6P2P2 845 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 WDR75Q8IWA0 830 aaKnown RBP12.84□□□□□ -0.35
EXT1-203ENST00000437196 ZNF781Q8N8C0 355 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 PIWIL2Q8TC59 973 aaKnown RBP12.84□□□□□ -0.35
EXT1-203ENST00000437196 PROKR1Q8TCW9 393 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 AGR3Q8TD06 166 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 MTFMTQ96DP5 389 aaKnown RBP12.84□□□□□ -0.35
EXT1-203ENST00000437196 CLIP3Q96DZ5 547 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 METTL2AQ96IZ6 378 aaKnown RBP12.84□□□□□ -0.35
EXT1-203ENST00000437196 SLC46A1Q96NT5 459 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 KCNC2Q96PR1 638 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 KCNA7Q96RP8 456 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 SORT1Q99523 831 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 DPH2Q9BQC3 489 aaPredicted RBP12.84□□□□□ -0.35
EXT1-203ENST00000437196 MS4A8Q9BY19 250 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 ULBP3Q9BZM4 244 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 SPRTNQ9H040 489 aaPredicted RBP12.84□□□□□ -0.35
EXT1-203ENST00000437196 ACTR5Q9H9F9 607 aaPredicted RBP12.84□□□□□ -0.35
EXT1-203ENST00000437196 ANKHQ9HCJ1 492 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 CUTCQ9NTM9 273 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 VPS29Q9UBQ0 182 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 FIS1Q9Y3D6 152 aa12.84□□□□□ -0.35
EXT1-203ENST00000437196 TRPC5OSA6NMA1 111 aa12.83□□□□□ -0.36
EXT1-203ENST00000437196 DXOO77932 396 aaKnown RBP12.83□□□□□ -0.36
EXT1-203ENST00000437196 SEMA3DO95025 777 aa12.83□□□□□ -0.36
EXT1-203ENST00000437196 TGFB1P01137 390 aa12.83□□□□□ -0.36
EXT1-203ENST00000437196 KLK3P07288 261 aaPredicted RBP12.83□□□□□ -0.36
EXT1-203ENST00000437196 PIM1P11309 404 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms