RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 NDNFQ8TB73 568 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 CSGALNACT1Q8TDX6 532 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 MAGED4Q96JG8 741 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 DACH2Q96NX9 599 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 TM9SF3Q9HD45 589 aa10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 SPATA6Q9NWH7 488 aaPredicted RBP10.04□□□□□ -0.8
CLSTN1-203ENST00000435891 RANBP2P49792 3224 aaKnown RBP10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 PABPN1LA6NDY0 278 aaKnown RBP10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 TTC34A8MYJ7 566 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 GCM2O75603 506 aaPredicted RBP10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 LRG1P02750 347 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 CTSLP07711 333 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 ACVR2AP27037 513 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 WEE1P30291 646 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 ZNF846Q147U1 533 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 AGTRAPQ6RW13 159 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 ZNF852Q6ZMS4 543 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 TSEN54Q7Z6J9 526 aaKnown RBP10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 RASGRP3Q8IV61 690 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 TTC29Q8NA56 475 aaPredicted RBP10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 SPERTQ8NA61 448 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 ZNF296Q8WUU4 475 aaPredicted RBP10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 ZNF486Q96H40 463 aaPredicted RBP10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 DEPDC7Q96QD5 511 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 MIR1-1HGQ9H1L0 117 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 NEK6Q9HC98 313 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 STOX2Q9P2F5 926 aaPredicted RBP10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 EXO1Q9UQ84 846 aaKnown RBP10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 SH2B3Q9UQQ2 575 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 GMPPBQ9Y5P6 360 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 AGRPO00253 132 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 UGT2B11O75310 529 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 SLCO2B1O94956 709 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 FADS2O95864 444 aaKnown RBP10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 MT-ND2P03891 347 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 ABCB1P08183 1280 aaPredicted RBP10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 ITGB8P26012 769 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 PBLDP30039 288 aaPredicted RBP10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 AP1S2P56377 157 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 VBP1P61758 197 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 ACSM2AQ08AH3 577 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 ARSIQ5FYB1 569 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 CEP78Q5JTW2 689 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 ACSM2BQ68CK6 577 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 CAPN13Q6MZZ7 669 aaPredicted RBP10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 CBLL1Q75N03 491 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 METTL3Q86U44 580 aaKnown RBP10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 ANKRD13BQ86YJ7 626 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 GRAMD2AQ8IUY3 354 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 SLC38A6Q8IZM9 456 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 ELMOD1Q8N336 334 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 NATD1Q8N6N6 113 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 RASGEF1AQ8N9B8 481 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 OR8J2Q8NGG1 315 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 ASZ1Q8WWH4 475 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 GABARAPL1Q9H0R8 117 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 DUSP21Q9H596 190 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 GULP1Q9UBP9 304 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 SLC25A13Q9UJS0 675 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 FZD4Q9ULV1 537 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 M0QX08 132 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 M0R3G1 203 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 GRM6O15303 877 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 PCDH7O60245 1069 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 OPN1SWP03999 348 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 ALOX5P09917 674 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 DNAJA1P31689 397 aaKnown RBP10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 SRSF11Q05519 484 aaKnown RBP10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 SP140Q13342 867 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 RFX4Q33E94 735 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 ZNF385BQ569K4 471 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 TTC23LQ6PF05 361 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 ADCK1Q86TW2 530 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 HORMAD1Q86X24 394 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 ATG16L2Q8NAA4 619 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 RPL3LQ92901 407 aaKnown RBP10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 ZNF566Q969W8 418 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 C7orf34Q96L11 122 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 ALPK1Q96QP1 1244 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 DUSP26Q9BV47 211 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 SGK2Q9HBY8 427 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 PRM3Q9NNZ6 103 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 GPATCH2Q9NW75 528 aa10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 THUMPD1Q9NXG2 353 aaKnown RBP10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 NDRG4Q9ULP0 352 aaKnown RBP10.03□□□□□ -0.8
CLSTN1-203ENST00000435891 USP34Q70CQ2 3546 aa10.02□□□□□ -0.8
CLSTN1-203ENST00000435891 NPC1O15118 1278 aa10.02□□□□□ -0.8
CLSTN1-203ENST00000435891 PCDHGA12O60330 932 aa10.02□□□□□ -0.8
CLSTN1-203ENST00000435891 WBP4O75554 376 aaKnown RBP10.02□□□□□ -0.8
CLSTN1-203ENST00000435891 CCNKO75909 580 aa10.02□□□□□ -0.8
CLSTN1-203ENST00000435891 GSTM1P09488 218 aa10.02□□□□□ -0.8
CLSTN1-203ENST00000435891 FPR1P21462 350 aa10.02□□□□□ -0.8
CLSTN1-203ENST00000435891 IMPA1P29218 277 aa10.02□□□□□ -0.8
CLSTN1-203ENST00000435891 CREMQ03060 361 aa10.02□□□□□ -0.8
CLSTN1-203ENST00000435891 TOP3AQ13472 1001 aaPredicted RBP10.02□□□□□ -0.8
CLSTN1-203ENST00000435891 CYP27C1Q4G0S4 372 aa10.02□□□□□ -0.8
CLSTN1-203ENST00000435891 LIPJQ5W064 366 aa10.02□□□□□ -0.8
CLSTN1-203ENST00000435891 SIGIRRQ6IA17 410 aa10.02□□□□□ -0.8
CLSTN1-203ENST00000435891 CNKSR3Q6P9H4 555 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms