RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 TNFRSF21O75509 655 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 CLTBP09497 229 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 CSF2RAP15509 400 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 RXRGP48443 463 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 RPP38P78345 283 aaKnown RBP15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 IL1RL1Q01638 556 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 CAMK2GQ13555 558 aaPredicted RBP15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 PDE7AQ13946 482 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 ELOAQ14241 798 aaKnown RBP15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 NR1D2Q14995 579 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 CLCA4Q14CN2 919 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 SMN1Q16637 294 aaKnown RBP15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 ADPRMQ3LIE5 342 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 IGFN1Q86VF2 1251 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 LAS2Q8IYD9 372 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 NAGSQ8N159 534 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 KLHL23Q8NBE8 558 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 APH1BQ8WW43 257 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 IPCEF1Q8WWN9 437 aaPredicted RBP15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 OTUB2Q96DC9 234 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 TPD52L3Q96J77 140 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 COQ10AQ96MF6 247 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 MYOCQ99972 504 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 RHNO1Q9BSD3 238 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 SGPP1Q9BX95 441 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 REEP4Q9H6H4 257 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 ACOT13Q9NPJ3 140 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 AKIP1Q9NQ31 210 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 LMCD1Q9NZU5 365 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 KIF17Q9P2E2 1029 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 RGS10O43665 173 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 PCDHGA12O60330 932 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 SOD1P00441 154 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 XPAP23025 273 aaPredicted RBP15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 IDUAP35475 653 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 NNMTP40261 264 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 TBPL1P62380 186 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 CSNK2BP67870 215 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 ARHGAP15Q53QZ3 475 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 PARS2Q7L3T8 475 aaKnown RBP15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 ARMCX6Q7L4S7 300 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 CENPSQ8N2Z9 138 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 GPR156Q8NFN8 814 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 RNF217Q8TC41 542 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 MAL2Q969L2 176 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 CRISPLD2Q9H0B8 497 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 EHD1Q9H4M9 534 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 NDUFAF4Q9P032 175 aa15.46■□□□□ 0.07
HLA-DQB2-231ENST00000435145 NUP214P35658 2090 aaPredicted RBP15.46■□□□□ 0.06
HLA-DQB2-231ENST00000435145 PTPRSQ13332 1948 aa15.46■□□□□ 0.06
HLA-DQB2-231ENST00000435145 CLDN25C9JDP6 229 aa15.45■□□□□ 0.06
HLA-DQB2-231ENST00000435145 H3BM21 787 aa15.45■□□□□ 0.06
HLA-DQB2-231ENST00000435145 SPINT1O43278 529 aa15.45■□□□□ 0.06
HLA-DQB2-231ENST00000435145 KLHL18O94889 574 aa15.45■□□□□ 0.06
HLA-DQB2-231ENST00000435145 SRPRAP08240 638 aaKnown RBP15.45■□□□□ 0.06
HLA-DQB2-231ENST00000435145 ELFN1P0C7U0 828 aa15.45■□□□□ 0.06
HLA-DQB2-231ENST00000435145 NPPBP16860 134 aa15.45■□□□□ 0.06
HLA-DQB2-231ENST00000435145 PTPN2P17706 415 aa15.45■□□□□ 0.06
HLA-DQB2-231ENST00000435145 SELENOWP63302 87 aa15.45■□□□□ 0.06
HLA-DQB2-231ENST00000435145 ZNF763Q0D2J5 394 aa15.45■□□□□ 0.06
HLA-DQB2-231ENST00000435145 TMPRSS11BQ86T26 416 aa15.45■□□□□ 0.06
HLA-DQB2-231ENST00000435145 LRRC56Q8IYG6 542 aaPredicted RBP15.45■□□□□ 0.06
HLA-DQB2-231ENST00000435145 ENTHD1Q8IYW4 607 aa15.45■□□□□ 0.06
HLA-DQB2-231ENST00000435145 ZNF540Q8NDQ6 660 aa15.45■□□□□ 0.06
HLA-DQB2-231ENST00000435145 OR4A15Q8NGL6 344 aa15.45■□□□□ 0.06
HLA-DQB2-231ENST00000435145 DTD2Q96FN9 168 aa15.45■□□□□ 0.06
HLA-DQB2-231ENST00000435145 EFCAB11Q9BUY7 163 aa15.45■□□□□ 0.06
HLA-DQB2-231ENST00000435145 GPBP1L1Q9HC44 474 aaPredicted RBP15.45■□□□□ 0.06
HLA-DQB2-231ENST00000435145 DMRT3Q9NQL9 472 aa15.45■□□□□ 0.06
HLA-DQB2-231ENST00000435145 SH2B3Q9UQQ2 575 aa15.45■□□□□ 0.06
HLA-DQB2-231ENST00000435145 TDRKHQ9Y2W6 561 aaKnown RBP15.45■□□□□ 0.06
HLA-DQB2-231ENST00000435145 PCDHGA6Q9Y5G7 932 aa15.45■□□□□ 0.06
HLA-DQB2-231ENST00000435145 LYVE1Q9Y5Y7 322 aa15.45■□□□□ 0.06
HLA-DQB2-231ENST00000435145 WNT6Q9Y6F9 365 aa15.45■□□□□ 0.06
HLA-DQB2-231ENST00000435145 GNG14A0A1W2PPG7 69 aa15.44■□□□□ 0.06
HLA-DQB2-231ENST00000435145 FAM20BO75063 409 aa15.44■□□□□ 0.06
HLA-DQB2-231ENST00000435145 SH3BGRLO75368 114 aa15.44■□□□□ 0.06
HLA-DQB2-231ENST00000435145 RHOP08100 348 aa15.44■□□□□ 0.06
HLA-DQB2-231ENST00000435145 CISD3P0C7P0 127 aa15.44■□□□□ 0.06
HLA-DQB2-231ENST00000435145 RRM2P31350 389 aa15.44■□□□□ 0.06
HLA-DQB2-231ENST00000435145 HBA1P69905 142 aa15.44■□□□□ 0.06
HLA-DQB2-231ENST00000435145 EEF1A2Q05639 463 aaKnown RBP15.44■□□□□ 0.06
HLA-DQB2-231ENST00000435145 RBBP4Q09028 425 aa15.44■□□□□ 0.06
HLA-DQB2-231ENST00000435145 FCHO2Q0JRZ9 810 aa15.44■□□□□ 0.06
HLA-DQB2-231ENST00000435145 ZNF846Q147U1 533 aa15.44■□□□□ 0.06
HLA-DQB2-231ENST00000435145 GRIN2CQ14957 1233 aa15.44■□□□□ 0.06
HLA-DQB2-231ENST00000435145 MLIPQ5VWP3 458 aa15.44■□□□□ 0.06
HLA-DQB2-231ENST00000435145 ERAP2Q6P179 960 aa15.44■□□□□ 0.06
HLA-DQB2-231ENST00000435145 CCDC80Q76M96 950 aa15.44■□□□□ 0.06
HLA-DQB2-231ENST00000435145 OTOP2Q7RTS6 562 aa15.44■□□□□ 0.06
HLA-DQB2-231ENST00000435145 COMMD6Q7Z4G1 85 aa15.44■□□□□ 0.06
HLA-DQB2-231ENST00000435145 P2RY8Q86VZ1 359 aa15.44■□□□□ 0.06
HLA-DQB2-231ENST00000435145 VN1R2Q8NFZ6 395 aa15.44■□□□□ 0.06
HLA-DQB2-231ENST00000435145 OR52N2Q8NGI0 321 aa15.44■□□□□ 0.06
HLA-DQB2-231ENST00000435145 OR4C15Q8NGM1 316 aa15.44■□□□□ 0.06
HLA-DQB2-231ENST00000435145 SNRNP27Q8WVK2 155 aaKnown RBP15.44■□□□□ 0.06
HLA-DQB2-231ENST00000435145 UBE2FQ969M7 185 aa15.44■□□□□ 0.06
HLA-DQB2-231ENST00000435145 SH3BP4Q9P0V3 963 aa15.44■□□□□ 0.06
HLA-DQB2-231ENST00000435145 ITM2BQ9Y287 266 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms