RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 KLHL12Q53G59 568 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 P2RY8Q86VZ1 359 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 OR5P2Q8WZ92 322 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 ZC4H2Q9NQZ6 224 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 NLGN3Q9NZ94 848 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 LIPT1Q9Y234 373 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 SCDO00767 359 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 KAT7O95251 611 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 TARDBPQ13148 414 aaKnown RBP eCLIP11.15□□□□□ -0.62
PTCH1-208ENST00000430669 PSAPL1Q6NUJ1 521 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 TMEM214Q6NUQ4 689 aaKnown RBP11.15□□□□□ -0.62
PTCH1-208ENST00000430669 OR52J3Q8NH60 311 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 ZCCHC3Q9NUD5 404 aaKnown RBP11.15□□□□□ -0.62
PTCH1-208ENST00000430669 ZNF624Q9P2J8 865 aaPredicted RBP11.15□□□□□ -0.62
PTCH1-208ENST00000430669 CIDEBQ9UHD4 219 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 DPPA5A6NC42 116 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 HMGN1P05114 100 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 GRK6P43250 576 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 OR4F3Q6IEY1 312 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 OR10G2Q8NGC3 310 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 ESAMQ96AP7 390 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 MAPKAP1Q9BPZ7 522 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 PELOQ9BRX2 385 aaKnown RBP11.15□□□□□ -0.62
PTCH1-208ENST00000430669 COPS4Q9BT78 406 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 GPR34Q9UPC5 381 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 TMEM5Q9Y2B1 443 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 SESN1Q9Y6P5 492 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 HSD17B1P14061 328 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 ATF6P18850 670 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 ARSDP51689 593 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 CDHR3Q6ZTQ4 885 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 VN1R5Q7Z5H4 357 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 SYVN1Q86TM6 617 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 TMEM145Q8NBT3 493 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 MCFD2Q8NI22 146 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 FBXL8Q96CD0 374 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 C19orf43Q9BQ61 176 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 CCM2LQ9NUG4 571 aaPredicted RBP11.15□□□□□ -0.62
PTCH1-208ENST00000430669 ITPKBP27987 946 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 ITGADQ13349 1161 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 SPANXN4Q5MJ08 99 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 SLC29A4Q7RTT9 530 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 SLCO6A1Q86UG4 719 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 WDR92Q96MX6 357 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 HLA-EP13747 358 aa11.15□□□□□ -0.63
PTCH1-208ENST00000430669 FPR1P21462 350 aa11.15□□□□□ -0.63
PTCH1-208ENST00000430669 TNFRSF4P43489 277 aa11.15□□□□□ -0.63
PTCH1-208ENST00000430669 DCDC1P59894 354 aa11.15□□□□□ -0.63
PTCH1-208ENST00000430669 PPP1R3AQ16821 1122 aa11.15□□□□□ -0.63
PTCH1-208ENST00000430669 KIAA1614Q5VZ46 1190 aa11.15□□□□□ -0.63
PTCH1-208ENST00000430669 TMEM25Q86YD3 366 aa11.15□□□□□ -0.63
PTCH1-208ENST00000430669 CD200R1Q8TD46 325 aa11.15□□□□□ -0.63
PTCH1-208ENST00000430669 KLK6Q92876 244 aa11.15□□□□□ -0.63
PTCH1-208ENST00000430669 UFD1Q92890 307 aa11.15□□□□□ -0.63
PTCH1-208ENST00000430669 TUBA1CQ9BQE3 449 aa11.15□□□□□ -0.63
PTCH1-208ENST00000430669 ZNF395Q9H8N7 513 aaPredicted RBP11.15□□□□□ -0.63
PTCH1-208ENST00000430669 HS3ST2Q9Y278 367 aa11.15□□□□□ -0.63
PTCH1-208ENST00000430669 RFPL2O75678 378 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 GDF5P43026 501 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 DGKQP52824 942 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 BTN3A2P78410 334 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 CDKL1Q00532 357 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 GBX1Q14549 363 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 TNFAIP8L2Q6P589 184 aaPredicted RBP11.14□□□□□ -0.63
PTCH1-208ENST00000430669 NXPE4Q6UWF7 544 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 BIRC7Q96CA5 298 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 TSC2P49815 1807 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 LOC110117498-PIK3R3F6TDL0 507 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 FAUP35544 74 aaKnown RBP11.14□□□□□ -0.63
PTCH1-208ENST00000430669 PREPP48147 710 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 SEMA3BQ13214 749 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 RSBN1Q5VWQ0 802 aaPredicted RBP11.14□□□□□ -0.63
PTCH1-208ENST00000430669 LCN8Q6JVE9 175 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 AHSA2Q719I0 299 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 ZNF420Q8TAQ5 688 aaPredicted RBP11.14□□□□□ -0.63
PTCH1-208ENST00000430669 PIK3R3Q92569 461 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 SLC39A3Q9BRY0 314 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 CDADC1Q9BWV3 514 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 TOR4AQ9NXH8 423 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 TMEM9Q9P0T7 183 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 CLCA3PQ9Y6N3 262 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 RPLP0P05388 317 aaKnown RBP11.14□□□□□ -0.63
PTCH1-208ENST00000430669 C8BP07358 591 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 DGKEP52429 567 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 SH3BP2P78314 561 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 ADAM17P78536 824 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 ST3GAL3Q11203 375 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 ABRAXAS2Q15018 415 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 CYBRD1Q53TN4 286 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 TMBIM1Q969X1 311 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 PKP2Q99959 881 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 PELI2Q9HAT8 420 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 RHBDL2Q9NX52 303 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 KIAA0355O15063 1070 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 ABLIM3O94929 683 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 MTHFD1P11586 935 aaKnown RBP11.14□□□□□ -0.63
PTCH1-208ENST00000430669 GKP32189 559 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 CCT3P49368 545 aaKnown RBP11.14□□□□□ -0.63
PTCH1-208ENST00000430669 CLCN7P51798 805 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 TNFAIP8L3Q5GJ75 292 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms