RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 FAM20CQ8IXL6 584 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 C2orf73Q8N5S3 287 aaPredicted RBP8.67□□□□□ -1.02
SMC1A-203ENST00000428014 PPFIBP2Q8ND30 876 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 PLPP5Q8NEB5 264 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 ACMSDQ8TDX5 336 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 MIEF2Q96C03 454 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 PTCD3Q96EY7 689 aaKnown RBP8.67□□□□□ -1.02
SMC1A-203ENST00000428014 LMF1Q96S06 567 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 SLC25A23Q9BV35 468 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 TXLNGYQ9BZA5 131 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 SEMA4CQ9C0C4 833 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 ROGDIQ9GZN7 287 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 RNF32Q9H0A6 362 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 ANKHQ9HCJ1 492 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 DNAJC11Q9NVH1 559 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 RIC8BQ9NVN3 520 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 GPR83Q9NYM4 423 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 BAHCC1Q9P281 2608 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 C19orf25Q9UFG5 118 aaPredicted RBP8.67□□□□□ -1.02
SMC1A-203ENST00000428014 BSNQ9UPA5 3926 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 SLC22A14Q9Y267 594 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 KLHL20Q9Y2M5 609 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 HEMK1Q9Y5R4 338 aaPredicted RBP8.67□□□□□ -1.02
SMC1A-203ENST00000428014 HS3ST3B1Q9Y662 390 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 IKBKGQ9Y6K9 419 aa8.67□□□□□ -1.02
SMC1A-203ENST00000428014 ESYT3A0FGR9 886 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 STX16-NPEPL1H3BU86 382 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 STX16O14662 325 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 GALR3O60755 368 aaPredicted RBP8.66□□□□□ -1.02
SMC1A-203ENST00000428014 WFS1O76024 890 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 SCELO95171 688 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 BMP10O95393 424 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 ALDOAP04075 364 aaKnown RBP8.66□□□□□ -1.02
SMC1A-203ENST00000428014 S100BP04271 92 aaPredicted RBP8.66□□□□□ -1.02
SMC1A-203ENST00000428014 CTSBP07858 339 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 CDH1P12830 882 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 MTHFD2P13995 350 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 ALOX12P18054 663 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 JAK1P23458 1154 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 HNF4AP41235 474 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 CD97P48960 835 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 PGDP52209 483 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 ALDH18A1P54886 795 aaKnown RBP8.66□□□□□ -1.02
SMC1A-203ENST00000428014 RPS18P62269 152 aaKnown RBP8.66□□□□□ -1.02
SMC1A-203ENST00000428014 YBX1P67809 324 aaKnown RBP8.66□□□□□ -1.02
SMC1A-203ENST00000428014 ZNF33BQ06732 778 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 KLC1Q07866 573 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 RCN2Q14257 317 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 PDK4Q16654 411 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 TUBB8Q3ZCM7 444 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 TMEM35AQ53FP2 167 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 LIPJQ5W064 366 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 B3GNTL1Q67FW5 361 aaPredicted RBP8.66□□□□□ -1.02
SMC1A-203ENST00000428014 KIRREL2Q6UWL6 708 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 TMIGD1Q6UXZ0 262 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 NDUFAF7Q7L592 441 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 ADCK2Q7Z695 626 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 LAS2Q8IYD9 372 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 CENPLQ8N0S6 344 aaPredicted RBP8.66□□□□□ -1.02
SMC1A-203ENST00000428014 LGI4Q8N135 537 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 GALNT16Q8N428 558 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 OR11G2Q8NGC1 345 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 ZNF592Q92610 1267 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 GAL3ST3Q96A11 431 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 COL26A1Q96A83 441 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 RUFY1Q96T51 708 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 EGFL8Q99944 293 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 TUBB6Q9BUF5 446 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 CRB3Q9BUF7 120 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 C1QTNF3Q9BXJ4 246 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 CD244Q9BZW8 370 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 IGSF5Q9NSI5 407 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 CIDEBQ9UHD4 219 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 IKZF3Q9UKT9 509 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 RNF112Q9ULX5 631 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 PCDHGB6Q9Y5F9 930 aa8.66□□□□□ -1.02
SMC1A-203ENST00000428014 POLEQ07864 2286 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 DOCK10Q96BY6 2186 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 A0A096LPK6 155 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 KRT87PA6NCN2 255 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 NPEPPSL1A6NEC2 478 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 MAGEB17A8MXT2 336 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 IDSB3KWA1 339 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 RNF223E7ERA6 249 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 H3BQF6 201 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 J3QKU1 62 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 K7EPI3 171 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 MAP2K7O14733 419 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 CLGNO14967 610 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 P2RX6O15547 441 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 LCMT2O60294 686 aaKnown RBP8.65□□□□□ -1.02
SMC1A-203ENST00000428014 GUCA1CO95843 209 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 EIF2S1P05198 315 aaKnown RBP8.65□□□□□ -1.02
SMC1A-203ENST00000428014 SERPINA7P05543 415 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 TUBBP07437 444 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 GSTA1P08263 222 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 SNRPAP09012 282 aaKnown RBP8.65□□□□□ -1.02
SMC1A-203ENST00000428014 PLA2G2AP14555 144 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 ACPPP15309 386 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 TFEBP19484 476 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms