RNA–Protein interactions for RNA: ENST00000425989.5

HDLBP-211, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-211ENST00000425989 C1orf50Q9BV19 199 aa9.2□□□□□ -0.94
HDLBP-211ENST00000425989 DDX31Q9H8H2 851 aaKnown RBP9.2□□□□□ -0.94
HDLBP-211ENST00000425989 WDR41Q9HAD4 459 aa9.2□□□□□ -0.94
HDLBP-211ENST00000425989 CLK4Q9HAZ1 481 aaKnown RBP9.2□□□□□ -0.94
HDLBP-211ENST00000425989 SLC52A3Q9NQ40 469 aa9.2□□□□□ -0.94
HDLBP-211ENST00000425989 CUEDC1Q9NWM3 386 aaPredicted RBP9.2□□□□□ -0.94
HDLBP-211ENST00000425989 SPHK1Q9NYA1 384 aa9.2□□□□□ -0.94
HDLBP-211ENST00000425989 POLR3HQ9Y535 204 aaPredicted RBP9.2□□□□□ -0.94
HDLBP-211ENST00000425989 SNX11Q9Y5W9 270 aa9.2□□□□□ -0.94
HDLBP-211ENST00000425989 SLCO1B1Q9Y6L6 691 aa9.2□□□□□ -0.94
HDLBP-211ENST00000425989 TP53BP1Q12888 1972 aaPredicted RBP9.2□□□□□ -0.94
HDLBP-211ENST00000425989 UNC80Q8N2C7 3258 aa9.2□□□□□ -0.94
HDLBP-211ENST00000425989 IGKV1-8A0A0C4DH67 115 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 GNG14A0A1W2PPG7 69 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 GSAPA4D1B5 854 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 LRIT2A6NDA9 550 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 B4DGG1 531 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 PPM1DO15297 605 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 LCMT2O60294 686 aaKnown RBP9.19□□□□□ -0.94
HDLBP-211ENST00000425989 CER1O95813 267 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 PGRP06401 933 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 PROS1P07225 676 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 SDC1P18827 310 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 ITGAXP20702 1163 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 PEBP1P30086 187 aaKnown RBP9.19□□□□□ -0.94
HDLBP-211ENST00000425989 HPCAL1P37235 193 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 NUDT2P50583 147 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 DUSP3P51452 185 aaPredicted RBP9.19□□□□□ -0.94
HDLBP-211ENST00000425989 PSME3P61289 254 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 SKP1P63208 163 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 NR1D2Q14995 579 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 SPRED3Q2MJR0 410 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 VPS26BQ4G0F5 336 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 SAMD4BQ5PRF9 694 aaKnown RBP9.19□□□□□ -0.94
HDLBP-211ENST00000425989 CCNYL2Q5T2Q4 361 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 REP15Q6BDI9 236 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 TRIM40Q6P9F5 258 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 GK5Q6ZS86 529 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 ARMCX6Q7L4S7 300 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 ZNF438Q7Z4V0 828 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 NET1Q7Z628 596 aaPredicted RBP9.19□□□□□ -0.94
HDLBP-211ENST00000425989 PLXDC1Q8IUK5 500 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 DEFB107AQ8IZN7 70 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 SLC25A45Q8N413 288 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 C1orf52Q8N6N3 182 aaKnown RBP9.19□□□□□ -0.94
HDLBP-211ENST00000425989 ANKRD53Q8N9V6 530 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 ZNF740Q8NDX6 193 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 OR10G6Q8NH81 332 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 FLVCR1-AS1Q8TAF5 88 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.19□□□□□ -0.94
HDLBP-211ENST00000425989 BAHD1Q8TBE0 780 aaPredicted RBP9.19□□□□□ -0.94
HDLBP-211ENST00000425989 SLC13A3Q8WWT9 602 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 RERGQ96A58 199 aaPredicted RBP9.19□□□□□ -0.94
HDLBP-211ENST00000425989 LRRC58Q96CX6 371 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 RCN3Q96D15 328 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 KCNC2Q96PR1 638 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 OR52E6Q96RD3 313 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 CDRT15Q96T59 188 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 HBEGFQ99075 208 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 PRRX2Q99811 253 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 REXO4Q9GZR2 422 aaKnown RBP9.19□□□□□ -0.94
HDLBP-211ENST00000425989 KCNH6Q9H252 994 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 MYNNQ9NPC7 610 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 FAM120CQ9NX05 1096 aaKnown RBP9.19□□□□□ -0.94
HDLBP-211ENST00000425989 MAP10Q9P2G4 905 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 LRIT1Q9P2V4 623 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 GIMAP2Q9UG22 337 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 ATP6V1HQ9UI12 483 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 POMT2Q9UKY4 750 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 PSME2Q9UL46 239 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 SH2B3Q9UQQ2 575 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 PCDHGA4Q9Y5G9 962 aa9.19□□□□□ -0.94
HDLBP-211ENST00000425989 PRAMEF33A0A0G2JMD5 474 aa9.18□□□□□ -0.94
HDLBP-211ENST00000425989 PRSS51A0A1B0GVH4 220 aa9.18□□□□□ -0.94
HDLBP-211ENST00000425989 NR5A2O00482 541 aa9.18□□□□□ -0.94
HDLBP-211ENST00000425989 FBP2O00757 339 aa9.18□□□□□ -0.94
HDLBP-211ENST00000425989 ARHGAP33O14559 1287 aa9.18□□□□□ -0.94
HDLBP-211ENST00000425989 TOX3O15405 576 aaPredicted RBP9.18□□□□□ -0.94
HDLBP-211ENST00000425989 PCDH7O60245 1069 aa9.18□□□□□ -0.94
HDLBP-211ENST00000425989 PCDHGA12O60330 932 aa9.18□□□□□ -0.94
HDLBP-211ENST00000425989 SNRNP200O75643 2136 aaKnown RBP9.18□□□□□ -0.94
HDLBP-211ENST00000425989 KCNH1O95259 989 aa9.18□□□□□ -0.94
HDLBP-211ENST00000425989 STAMBPO95630 424 aa9.18□□□□□ -0.94
HDLBP-211ENST00000425989 CELA2BP08218 269 aaPredicted RBP9.18□□□□□ -0.94
HDLBP-211ENST00000425989 SLC35G6P0C7Q6 338 aa9.18□□□□□ -0.94
HDLBP-211ENST00000425989 ZNF883P0CG24 379 aa9.18□□□□□ -0.94
HDLBP-211ENST00000425989 PPIBP23284 216 aaKnown RBP9.18□□□□□ -0.94
HDLBP-211ENST00000425989 ME2P23368 584 aa9.18□□□□□ -0.94
HDLBP-211ENST00000425989 PSMB5P28074 263 aa9.18□□□□□ -0.94
HDLBP-211ENST00000425989 BSGP35613 385 aa9.18□□□□□ -0.94
HDLBP-211ENST00000425989 KIR3DL1P43629 444 aa9.18□□□□□ -0.94
HDLBP-211ENST00000425989 CPA2P48052 419 aa9.18□□□□□ -0.94
HDLBP-211ENST00000425989 EMP3P54852 163 aa9.18□□□□□ -0.94
HDLBP-211ENST00000425989 MTTPP55157 894 aa9.18□□□□□ -0.94
HDLBP-211ENST00000425989 KCNJ2P63252 427 aa9.18□□□□□ -0.94
HDLBP-211ENST00000425989 RAE1P78406 368 aaKnown RBP9.18□□□□□ -0.94
HDLBP-211ENST00000425989 SLC25A3Q00325 362 aa9.18□□□□□ -0.94
HDLBP-211ENST00000425989 MEF2AQ02078 507 aaPredicted RBP9.18□□□□□ -0.94
HDLBP-211ENST00000425989 TRAP1Q12931 704 aaKnown RBP9.18□□□□□ -0.94
HDLBP-211ENST00000425989 MAP7Q14244 749 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms