RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 PRKAA2P54646 552 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 CDH13P55290 713 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 RPS18P62269 152 aaKnown RBP14.09□□□□□ -0.15
TMEM248-204ENST00000424964 HERVK_113P63132 956 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 MC1RQ01726 317 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 PCDH1Q08174 1060 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 FAM53BQ14153 422 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 NCF4Q15080 339 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 RBBP7Q16576 425 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 LIPJQ5W064 366 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 GRHL2Q6ISB3 625 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 TMEM214Q6NUQ4 689 aaKnown RBP14.09□□□□□ -0.15
TMEM248-204ENST00000424964 MED27Q6P2C8 311 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 INO80CQ6PI98 192 aaPredicted RBP14.09□□□□□ -0.15
TMEM248-204ENST00000424964 RPS27LQ71UM5 84 aaKnown RBP14.09□□□□□ -0.15
TMEM248-204ENST00000424964 OVCH1Q7RTY7 1134 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 ARHGEF39Q8N4T4 335 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 BANPQ8N9N5 519 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 NT5CQ8TCD5 201 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 CREB3L4Q8TEY5 395 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 STARD8Q92502 1023 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 CCDC126Q96EE4 140 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 MVB12AQ96EY5 273 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 CRELD1Q96HD1 420 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 ERVK-6Q9BXR3 956 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 ANKHQ9HCJ1 492 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 SEMA4BQ9NPR2 832 aaPredicted RBP14.09□□□□□ -0.15
TMEM248-204ENST00000424964 ACSS2Q9NR19 701 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 SLC22A11Q9NSA0 550 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 ARGLU1Q9NWB6 273 aaPredicted RBP14.09□□□□□ -0.15
TMEM248-204ENST00000424964 MKS1Q9NXB0 559 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 SENP1Q9P0U3 644 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 COPG2Q9UBF2 871 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 MID2Q9UJV3 735 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 PADI2Q9Y2J8 665 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 PLLPQ9Y342 182 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 PCDHGA6Q9Y5G7 932 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 PTPRQQ9UMZ3 2332 aa14.09□□□□□ -0.15
TMEM248-204ENST00000424964 CACNA1BQ00975 2339 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 URADA6NGE7 173 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 G3V2L1 256 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 OR7A17O14581 309 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 NKX2-8O15522 239 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 FOXS1O43638 330 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 UGDHO60701 494 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 CREG1O75629 220 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 CLDN9O95484 217 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 SERPINA6P08185 405 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 CD63P08962 238 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 MYZAPP0CAP1 466 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 PRKAR1AP10644 381 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 IL1RNP18510 177 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 STXBP1P61764 594 aaKnown RBP14.08□□□□□ -0.16
TMEM248-204ENST00000424964 CASP8Q14790 479 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 UNC50Q53HI1 259 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 TOR1AIP1Q5JTV8 583 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 ZNF678Q5SXM1 525 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 COX15Q7KZN9 410 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 ABHD13Q7L211 337 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 ARMC2Q8NEN0 867 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 OR52B6Q8NGF0 335 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 OR9A4Q8NGU2 314 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 RDH11Q8TC12 318 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 ZNF483Q8TF39 744 aaPredicted RBP14.08□□□□□ -0.16
TMEM248-204ENST00000424964 SEC16BQ96JE7 1060 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 CDK15Q96Q40 435 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 TMEM237Q96Q45 408 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 C1QTNF3Q9BXJ4 246 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 FAM117AQ9C073 453 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 RHBGQ9H310 441 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 KLHL31Q9H511 634 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 ZBTB26Q9HCK0 441 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 TCFL5Q9UL49 500 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 RNF11Q9Y3C5 154 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 PTRH2Q9Y3E5 179 aaKnown RBP14.08□□□□□ -0.16
TMEM248-204ENST00000424964 SLC22A7Q9Y694 548 aa14.08□□□□□ -0.16
TMEM248-204ENST00000424964 GOLGA6L10A6NI86 522 aa14.07□□□□□ -0.16
TMEM248-204ENST00000424964 CLEC3AO75596 197 aa14.07□□□□□ -0.16
TMEM248-204ENST00000424964 NSA2O95478 260 aaKnown RBP14.07□□□□□ -0.16
TMEM248-204ENST00000424964 ONECUT2O95948 504 aa14.07□□□□□ -0.16
TMEM248-204ENST00000424964 OTCP00480 354 aa14.07□□□□□ -0.16
TMEM248-204ENST00000424964 ALBP02768 609 aa14.07□□□□□ -0.16
TMEM248-204ENST00000424964 ZNF888P0CJ79 500 aaPredicted RBP14.07□□□□□ -0.16
TMEM248-204ENST00000424964 CREB1P16220 341 aa14.07□□□□□ -0.16
TMEM248-204ENST00000424964 SNRPNP63162 240 aaKnown RBP14.07□□□□□ -0.16
TMEM248-204ENST00000424964 OCA2Q04671 838 aa14.07□□□□□ -0.16
TMEM248-204ENST00000424964 CLCQ05315 142 aa14.07□□□□□ -0.16
TMEM248-204ENST00000424964 DDX39BQ13838 428 aaKnown RBP14.07□□□□□ -0.16
TMEM248-204ENST00000424964 DSG2Q14126 1118 aa14.07□□□□□ -0.16
TMEM248-204ENST00000424964 E2F2Q14209 437 aa14.07□□□□□ -0.16
TMEM248-204ENST00000424964 ERV3-1Q14264 604 aa14.07□□□□□ -0.16
TMEM248-204ENST00000424964 HERC3Q15034 1050 aa14.07□□□□□ -0.16
TMEM248-204ENST00000424964 CPSF6Q16630 551 aaKnown RBP eCLIP14.07□□□□□ -0.16
TMEM248-204ENST00000424964 FAM69BQ5VUD6 431 aa14.07□□□□□ -0.16
TMEM248-204ENST00000424964 ADNP2Q6IQ32 1131 aa14.07□□□□□ -0.16
TMEM248-204ENST00000424964 MRPL14Q6P1L8 145 aaKnown RBP14.07□□□□□ -0.16
TMEM248-204ENST00000424964 PRSS41Q7RTY9 318 aa14.07□□□□□ -0.16
TMEM248-204ENST00000424964 MILR1Q7Z6M3 343 aa14.07□□□□□ -0.16
TMEM248-204ENST00000424964 SYVN1Q86TM6 617 aa14.07□□□□□ -0.16
TMEM248-204ENST00000424964 CCNYL1Q8N7R7 359 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms