RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 SPASTQ9UBP0 616 aa13.66□□□□□ -0.22
TPM3P9-201ENST00000424846 STOML2Q9UJZ1 356 aa13.66□□□□□ -0.22
TPM3P9-201ENST00000424846 PCDHGB3Q9Y5G1 929 aa13.66□□□□□ -0.22
TPM3P9-201ENST00000424846 PCDHGA3Q9Y5H0 932 aa13.66□□□□□ -0.22
TPM3P9-201ENST00000424846 GFYI3L273 518 aa13.66□□□□□ -0.22
TPM3P9-201ENST00000424846 PCDH17O14917 1159 aa13.66□□□□□ -0.22
TPM3P9-201ENST00000424846 KMOO15229 486 aa13.66□□□□□ -0.22
TPM3P9-201ENST00000424846 CBSLP0DN79 551 aa13.66□□□□□ -0.22
TPM3P9-201ENST00000424846 CBSP35520 551 aa13.66□□□□□ -0.22
TPM3P9-201ENST00000424846 UGT2B10P36537 528 aa13.66□□□□□ -0.22
TPM3P9-201ENST00000424846 LIMK1P53667 647 aa13.66□□□□□ -0.22
TPM3P9-201ENST00000424846 MC1RQ01726 317 aa13.66□□□□□ -0.22
TPM3P9-201ENST00000424846 ACSM2AQ08AH3 577 aa13.66□□□□□ -0.22
TPM3P9-201ENST00000424846 LYPLAL1Q5VWZ2 237 aa13.66□□□□□ -0.22
TPM3P9-201ENST00000424846 ACSM2BQ68CK6 577 aa13.66□□□□□ -0.22
TPM3P9-201ENST00000424846 ERICH5Q6P6B1 374 aa13.66□□□□□ -0.22
TPM3P9-201ENST00000424846 CPA6Q8N4T0 437 aa13.66□□□□□ -0.22
TPM3P9-201ENST00000424846 C2orf15Q8WU43 125 aaKnown RBP13.66□□□□□ -0.22
TPM3P9-201ENST00000424846 GTPBP3Q969Y2 492 aaKnown RBP13.66□□□□□ -0.22
TPM3P9-201ENST00000424846 MED8Q96G25 268 aa13.66□□□□□ -0.22
TPM3P9-201ENST00000424846 KCNS3Q9BQ31 491 aa13.66□□□□□ -0.22
TPM3P9-201ENST00000424846 DOHHQ9BU89 302 aa13.66□□□□□ -0.22
TPM3P9-201ENST00000424846 C2orf49Q9BVC5 232 aaPredicted RBP13.66□□□□□ -0.22
TPM3P9-201ENST00000424846 TRIM39Q9HCM9 518 aa13.66□□□□□ -0.22
TPM3P9-201ENST00000424846 SH3BP4Q9P0V3 963 aa13.66□□□□□ -0.22
TPM3P9-201ENST00000424846 SCAMP2O15127 329 aaKnown RBP13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 SGTAO43765 313 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 NUAK1O60285 661 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 CRATP43155 626 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 RGS6P49758 472 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 SPIBQ01892 262 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 SMARCB1Q12824 385 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 VEZF1Q14119 521 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 IER5LQ5T953 404 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 RETSATQ6NUM9 610 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 ZNF783Q6ZMS7 281 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 OTOP2Q7RTS6 562 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 DNAJB7Q7Z6W7 309 aaPredicted RBP13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 LGI4Q8N135 537 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 CBARPQ8N350 705 aaPredicted RBP13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 OR5AK3PQ8NH89 298 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 CAPSLQ8WWF8 208 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 FAM120CQ9NX05 1096 aaKnown RBP13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 ERVK13-1Q9NX77 482 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 MS4A12Q9NXJ0 267 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 FBXL12Q9NXK8 326 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 PCDH10Q9P2E7 1040 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 ARHGEF33A8MVX0 844 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 SAP18O00422 153 aaKnown RBP13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 IDSP22304 550 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 CST5P28325 142 aaPredicted RBP13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 CASP3P42574 277 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 CCL23P55773 120 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 NAE1Q13564 534 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 GANABQ14697 944 aaKnown RBP13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 MSANTD1Q6ZTZ1 278 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 TPRG1Q6ZUI0 275 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 USP43Q70EL4 1123 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 THOC6Q86W42 341 aaKnown RBP13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 BBS7Q8IWZ6 715 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 PCSK9Q8NBP7 692 aaKnown RBP13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 B3GNT7Q8NFL0 401 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 OR4C15Q8NGM1 316 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 SCRN2Q96FV2 425 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 NXF2Q9GZY0 626 aaKnown RBP13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 SPATA6Q9NWH7 488 aaPredicted RBP13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 LRFN2Q9ULH4 789 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 IFT52Q9Y366 437 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 PCM1Q15154 2024 aa13.65□□□□□ -0.22
TPM3P9-201ENST00000424846 IGLV3-16A0A075B6K0 115 aa13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 NPIPB8E9PQR5 432 aa13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 RPLP0P05388 317 aaKnown RBP13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 SLC10A3P09131 477 aa13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 ANXA4P09525 319 aaPredicted RBP13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 OR56A5P0C7T3 313 aa13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 PREPP48147 710 aa13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 TGM4P49221 684 aa13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 TUBA1BP68363 451 aa13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 HBA1P69905 142 aa13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 CYP4F8P98187 520 aa13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 PRSS53Q2L4Q9 553 aa13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 ZNF181Q2M3W8 571 aa13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 CPTPQ5TA50 214 aa13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 TUBA1AQ71U36 451 aa13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 WDR53Q7Z5U6 358 aaPredicted RBP13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 HS6ST3Q8IZP7 471 aa13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 TCAIMQ8N3R3 496 aa13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 STX19Q8N4C7 294 aa13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 OR2AP1Q8NGE2 309 aa13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 CIDECQ96AQ7 238 aaPredicted RBP13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 WDR70Q9NW82 654 aa13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 RNF186Q9NXI6 227 aa13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 B4GALT6Q9UBX8 382 aa13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 PADI2Q9Y2J8 665 aa13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 TAF4O00268 1085 aa13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 AOC2O75106 756 aa13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 C8GP07360 202 aa13.64□□□□□ -0.23
TPM3P9-201ENST00000424846 SRCP12931 536 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms