RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 LYNP07948 512 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 STAG3L1P0CL83 205 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 SRMP19623 302 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 S1PR1P21453 382 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 TKTP29401 623 aaKnown RBP3.52□□□□□ -1.85
SF3B1-205ENST00000424674 HOXA6P31267 233 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 ACADVLP49748 655 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 RARRES1P49788 294 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 PPT1P50897 306 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 PLCD1P51178 756 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 CCNHP51946 323 aaPredicted RBP3.52□□□□□ -1.85
SF3B1-205ENST00000424674 ATP12AP54707 1039 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 CDH4P55283 916 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 GSCP56915 257 aaPredicted RBP3.52□□□□□ -1.85
SF3B1-205ENST00000424674 SLC37A1P57057 533 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 CLDN2P57739 230 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 GSDMDP57764 484 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 HNRNPKP61978 463 aaKnown RBP eCLIP3.52□□□□□ -1.85
SF3B1-205ENST00000424674 POLR2LP62875 67 aaKnown RBP3.52□□□□□ -1.85
SF3B1-205ENST00000424674 CDK3Q00526 305 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 BST1Q10588 318 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 ZSCAN26Q16670 478 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 ME3Q16798 604 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 PNLIPRP3Q17RR3 467 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 TBC1D25Q3MII6 688 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 RAET1LQ5VY80 246 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 ZDHHC20Q5W0Z9 365 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 DENND2CQ68D51 928 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 CD164L2Q6UWJ8 174 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 FAM159AQ6UWV7 190 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 QSOX2Q6ZRP7 698 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 EIF3MQ7L2H7 374 aaKnown RBP3.52□□□□□ -1.85
SF3B1-205ENST00000424674 TECPR1Q7Z6L1 1165 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 ASPGQ86U10 573 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 IGFN1Q86VF2 1251 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 ADGRF3Q8IZF5 1079 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 DSELQ8IZU8 1212 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 FAM58AQ8N1B3 248 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 LNX2Q8N448 690 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 CEP112Q8N8E3 955 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 PNPLA1Q8N8W4 532 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 ASCC1Q8N9N2 400 aaKnown RBP3.52□□□□□ -1.85
SF3B1-205ENST00000424674 OR4C5Q8NGB2 326 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 OR4A16Q8NH70 328 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 ERMNQ8TAM6 284 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 LRRC20Q8TCA0 184 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 ADAMTS14Q8WXS8 1223 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 ATG4AQ8WYN0 398 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 LPIN2Q92539 896 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 IGSF8Q969P0 613 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 FAM46BQ96A09 425 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 KIAA1143Q96AT1 154 aaPredicted RBP3.52□□□□□ -1.85
SF3B1-205ENST00000424674 WDYHV1Q96HA8 205 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 EGLN2Q96KS0 407 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 C4orf36Q96KX1 117 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 LURAP1Q96LR2 239 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 SFXN2Q96NB2 322 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 RASL10BQ96S79 203 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 OSBPL9Q96SU4 736 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 DDOQ99489 341 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 NPAS2Q99743 824 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 HAUS8Q9BT25 410 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 IDI2Q9BXS1 227 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 IL22Q9GZX6 179 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 TKTL2Q9H0I9 626 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 HDHD2Q9H0R4 259 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 ADNPQ9H2P0 1102 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 RAD21L1Q9H4I0 556 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 MAGIXQ9H6Y5 334 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 TMEM165Q9HC07 324 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 MMP25Q9NPA2 562 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 MED4Q9NPJ6 270 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 GPR173Q9NS66 373 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 ARL15Q9NXU5 204 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 RDH8Q9NYR8 311 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 PDP1Q9P0J1 537 aaPredicted RBP3.52□□□□□ -1.85
SF3B1-205ENST00000424674 FOXJ2Q9P0K8 574 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 GCNT4Q9P109 453 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 ERVK-18Q9QC07 812 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 NLKQ9UBE8 527 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 FZD10Q9ULW2 581 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 ICKQ9UPZ9 632 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 ZNF510Q9Y2H8 683 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 OR10H1Q9Y4A9 318 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 CEPT1Q9Y6K0 416 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 DISP3Q9P2K9 1392 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 FER1L4A9Z1Z3 1794 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 ARHGEF40Q8TER5 1519 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 TRGV11A0A075B6L2 103 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 A0A087X0K7 114 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 TRAV25A0A0B4J276 109 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 FAM90A10PA6NDY2 464 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 IQCF5A8MTL0 148 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 C12orf71A8MTZ7 269 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 ANKRD66B4E2M5 251 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 PDXKO00764 312 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 PPM1DO15297 605 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 TMPRSS11DO60235 418 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 NME2P1O60361 137 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 SAP30O75446 220 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms