RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 A0A1W2PRS3 328 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 KIR3DP1A8MWS1 328 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 AHRRA9YTQ3 701 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 H0YIG0 161 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 SGK494L7N484 410 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 CTIFO43310 598 aaKnown RBP5.85□□□□□ -1.47
SDCBP-203ENST00000424270 FOXS1O43638 330 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 HCN1O60741 890 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 B4GALT2O60909 372 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 ADAM11O75078 769 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 STK10O94804 968 aaKnown RBP5.85□□□□□ -1.47
SDCBP-203ENST00000424270 SOX30O94993 753 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 MATN4O95460 622 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 EPPINO95925 133 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 P04436 131 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 TPM2P07951 284 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 CD48P09326 243 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 TMIGD3P0DMS9 266 aaPredicted RBP5.85□□□□□ -1.47
SDCBP-203ENST00000424270 TCF4P15884 667 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 ZNF16P17020 682 aaPredicted RBP5.85□□□□□ -1.47
SDCBP-203ENST00000424270 ITGA2P17301 1181 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 ACADLP28330 430 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 TIMP3P35625 211 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 KCNJ5P48544 419 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 CLCN2P51788 898 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 PLOD1Q02809 727 aaPredicted RBP5.85□□□□□ -1.47
SDCBP-203ENST00000424270 HSPA14Q0VDF9 509 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 CAPRIN1Q14444 709 aaKnown RBP5.85□□□□□ -1.47
SDCBP-203ENST00000424270 HADHQ16836 314 aaKnown RBP5.85□□□□□ -1.47
SDCBP-203ENST00000424270 ACSF3Q4G176 576 aaPredicted RBP5.85□□□□□ -1.47
SDCBP-203ENST00000424270 DNAJC21Q5F1R6 531 aaKnown RBP5.85□□□□□ -1.47
SDCBP-203ENST00000424270 RNF187Q5TA31 235 aaPredicted RBP5.85□□□□□ -1.47
SDCBP-203ENST00000424270 CYB5R2Q6BCY4 276 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 SEM1Q6ZVN7 128 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 SNX20Q7Z614 316 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 MAP7D3Q8IWC1 876 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 FMR1NBQ8N0W7 255 aaPredicted RBP5.85□□□□□ -1.47
SDCBP-203ENST00000424270 OR2L3Q8NG85 312 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 OR6P1Q8NGX9 317 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 ZCCHC10Q8TBK6 192 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 ELP5Q8TE02 316 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 GCDHQ92947 438 aaPredicted RBP5.85□□□□□ -1.47
SDCBP-203ENST00000424270 PEX11GQ96HA9 241 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 QRFPRQ96P65 431 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 PIGQQ9BRB3 760 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 RHNO1Q9BSD3 238 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 PHACTR1Q9C0D0 580 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 GLOD4Q9HC38 313 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 ANKHQ9HCJ1 492 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 MRPL47Q9HD33 250 aaKnown RBP5.85□□□□□ -1.47
SDCBP-203ENST00000424270 MRPS30Q9NP92 439 aaKnown RBP5.85□□□□□ -1.47
SDCBP-203ENST00000424270 ZNF701Q9NV72 531 aaPredicted RBP5.85□□□□□ -1.47
SDCBP-203ENST00000424270 PCYOX1Q9UHG3 505 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 FAM153AQ9UHL3 310 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 KCNS2Q9ULS6 477 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 TESMINQ9Y4I5 508 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 ARID1AO14497 2285 aa5.85□□□□□ -1.47
SDCBP-203ENST00000424270 NOTCH1P46531 2555 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 ANK3Q12955 4377 aaKnown RBP5.84□□□□□ -1.47
SDCBP-203ENST00000424270 LRRD1A4D1F6 860 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 MAGEB17A8MXT2 336 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 DEFB108AA8MXU0 73 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 F8W8V4 182 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 CCL22O00626 93 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 PPP1R12AO14974 1030 aaPredicted RBP5.84□□□□□ -1.47
SDCBP-203ENST00000424270 DLX3O60479 287 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 LMX1BO60663 402 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 PHF2O75151 1096 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 RDH16O75452 317 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 SMNDC1O75940 238 aaKnown RBP eCLIP5.84□□□□□ -1.47
SDCBP-203ENST00000424270 AP2A2O94973 939 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 CRTAMO95727 393 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 OR56A5P0C7T3 313 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 CCDC172P0C7W6 258 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 PKMP14618 531 aaKnown RBP5.84□□□□□ -1.47
SDCBP-203ENST00000424270 IL1RNP18510 177 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 CNR1P21554 472 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 JAK1P23458 1154 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 CEACAM8P31997 349 aaPredicted RBP5.84□□□□□ -1.47
SDCBP-203ENST00000424270 MC4RP32245 332 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 RPA3P35244 121 aaPredicted RBP5.84□□□□□ -1.47
SDCBP-203ENST00000424270 SRP14P37108 136 aaKnown RBP5.84□□□□□ -1.47
SDCBP-203ENST00000424270 DNASE1L1P49184 302 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 MTTPP55157 894 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 MPP1Q00013 466 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 PPIDQ08752 370 aaKnown RBP5.84□□□□□ -1.47
SDCBP-203ENST00000424270 FOXO1Q12778 655 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 PKP1Q13835 747 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 RCAN2Q14206 197 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 TAF1AQ15573 450 aaPredicted RBP5.84□□□□□ -1.47
SDCBP-203ENST00000424270 SLC1A5Q15758 541 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 TMEM249Q2WGJ8 235 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 ZNF750Q32MQ0 723 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 CT47A1Q5JQC4 288 aaPredicted RBP5.84□□□□□ -1.47
SDCBP-203ENST00000424270 HECTD2Q5U5R9 776 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 SERPINA9Q86WD7 417 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 GPALPP1Q8IXQ4 340 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 PM20D2Q8IYS1 436 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 FBXO15Q8NCQ5 510 aaPredicted RBP5.84□□□□□ -1.47
SDCBP-203ENST00000424270 PTCHD1Q96NR3 888 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms