RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 CACNB4O00305 520 aaPredicted RBP14.66□□□□□ -0.06
C9orf3-204ENST00000424143 TNFRSF21O75509 655 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 AP2A2O94973 939 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 SLITRK5O94991 958 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 LRATO95237 230 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 VIPP01282 170 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 KRT8P05787 483 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 CKBP12277 381 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 RPL3P39023 403 aaKnown RBP14.66□□□□□ -0.06
C9orf3-204ENST00000424143 DDOSTP39656 456 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 MAPK9P45984 424 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 ST3GAL4Q11206 333 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 CHIT1Q13231 466 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 SF3B4Q15427 424 aaKnown RBP eCLIP14.66□□□□□ -0.061e-8■■□□□ 12.9
C9orf3-204ENST00000424143 CRB2Q5IJ48 1285 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 C16orf59Q7L2K0 433 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 ATCAYQ86WG3 371 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 SLC44A2Q8IWA5 706 aaPredicted RBP14.66□□□□□ -0.06
C9orf3-204ENST00000424143 NPAS3Q8IXF0 933 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 ADGRG2Q8IZP9 1017 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 OR6F1Q8NGZ6 308 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 TP53INP1Q96A56 240 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 SCRN2Q96FV2 425 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 MCCC1Q96RQ3 725 aaPredicted RBP14.66□□□□□ -0.06
C9orf3-204ENST00000424143 SLC30A2Q9BRI3 323 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 FZD3Q9NPG1 666 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 ASAH2Q9NR71 780 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 QPCTLQ9NXS2 382 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 HCN4Q9Y3Q4 1203 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 TBKBP1A7MCY6 615 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 PDZK1P1A8MUH7 402 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 CCRL2O00421 344 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 SEC14L5O43304 696 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 TSPAN3O60637 253 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 TBL1XO60907 577 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 CPSF4O95639 269 aaKnown RBP14.66□□□□□ -0.06
C9orf3-204ENST00000424143 EFEMP2O95967 443 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 IGSF6O95976 241 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 B3GALT4O96024 378 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 PTHP01270 115 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 STSP08842 583 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 LAMP1P11279 417 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 ALOX12P18054 663 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 IDSP22304 550 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 CBLP22681 906 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 SERPINA4P29622 427 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 TGFBR1P36897 503 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 HTR3AP46098 478 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 PFN3P60673 137 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 CDC42P60953 191 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 SNRPGP62308 76 aaKnown RBP14.66□□□□□ -0.06
C9orf3-204ENST00000424143 B4GALNT1Q00973 533 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 ACSM2AQ08AH3 577 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 SPIN4Q56A73 249 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 RTP2Q5QGT7 225 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 ACSM2BQ68CK6 577 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 LRRC66Q68CR7 880 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 TRIM69Q86WT6 500 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 HEATR4Q86WZ0 1026 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 OR52N2Q8NGI0 321 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 ECHDC3Q96DC8 303 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 B3GALT6Q96L58 329 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 CASD1Q96PB1 797 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 SDHCQ99643 169 aaPredicted RBP14.66□□□□□ -0.06
C9orf3-204ENST00000424143 EMILIN2Q9BXX0 1053 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 OR51E2Q9H255 320 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 TP63Q9H3D4 680 aaPredicted RBP14.66□□□□□ -0.06
C9orf3-204ENST00000424143 SYNDIG1Q9H7V2 258 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 ZNF556Q9HAH1 456 aa14.66□□□□□ -0.06
C9orf3-204ENST00000424143 AFF4Q9UHB7 1163 aaKnown RBP14.66□□□□□ -0.06
C9orf3-204ENST00000424143 WBP11Q9Y2W2 641 aaKnown RBP14.66□□□□□ -0.06
C9orf3-204ENST00000424143 A0A0U1RQS6 177 aa14.65□□□□□ -0.06
C9orf3-204ENST00000424143 ZAR1LA6NP61 321 aa14.65□□□□□ -0.06
C9orf3-204ENST00000424143 CCNKO75909 580 aa14.65□□□□□ -0.06
C9orf3-204ENST00000424143 CSKP41240 450 aa14.65□□□□□ -0.06
C9orf3-204ENST00000424143 SLC11A1P49279 550 aa14.65□□□□□ -0.06
C9orf3-204ENST00000424143 SEPHS1P49903 392 aa14.65□□□□□ -0.06
C9orf3-204ENST00000424143 IRF8Q02556 426 aa14.65□□□□□ -0.06
C9orf3-204ENST00000424143 GPR50Q13585 617 aa14.65□□□□□ -0.06
C9orf3-204ENST00000424143 TMEM201Q5SNT2 666 aa14.65□□□□□ -0.06
C9orf3-204ENST00000424143 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.65□□□□□ -0.06
C9orf3-204ENST00000424143 MPP7Q5T2T1 576 aa14.65□□□□□ -0.06
C9orf3-204ENST00000424143 PLAG1Q6DJT9 500 aa14.65□□□□□ -0.06
C9orf3-204ENST00000424143 CRTC1Q6UUV9 634 aa14.65□□□□□ -0.06
C9orf3-204ENST00000424143 Q6ZNB5 142 aa14.65□□□□□ -0.06
C9orf3-204ENST00000424143 SYTL1Q8IYJ3 562 aa14.65□□□□□ -0.06
C9orf3-204ENST00000424143 CYP4Z2PQ8N1L4 340 aa14.65□□□□□ -0.06
C9orf3-204ENST00000424143 FAM181AQ8N9Y4 354 aa14.65□□□□□ -0.06
C9orf3-204ENST00000424143 GPR26Q8NDV2 337 aa14.65□□□□□ -0.06
C9orf3-204ENST00000424143 SIMC1Q8NDZ2 872 aa14.65□□□□□ -0.06
C9orf3-204ENST00000424143 LILRB4Q8NHJ6 448 aa14.65□□□□□ -0.06
C9orf3-204ENST00000424143 RASSF5Q8WWW0 418 aa14.65□□□□□ -0.06
C9orf3-204ENST00000424143 GEMIN6Q8WXD5 167 aaKnown RBP14.65□□□□□ -0.06
C9orf3-204ENST00000424143 UPF1Q92900 1129 aaKnown RBP eCLIP14.65□□□□□ -0.06
C9orf3-204ENST00000424143 CLP1Q92989 425 aaKnown RBP14.65□□□□□ -0.06
C9orf3-204ENST00000424143 TPD52L3Q96J77 140 aa14.65□□□□□ -0.06
C9orf3-204ENST00000424143 MGLLQ99685 303 aa14.65□□□□□ -0.06
C9orf3-204ENST00000424143 MYOCQ99972 504 aa14.65□□□□□ -0.06
C9orf3-204ENST00000424143 CENPOQ9BU64 300 aa14.65□□□□□ -0.06
C9orf3-204ENST00000424143 GKN1Q9NS71 199 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms