RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 IGKV3-15P01624 115 aa3.11□□□□□ -1.91
LINC00397-201ENST00000422074 QDPRP09417 244 aa3.11□□□□□ -1.91
LINC00397-201ENST00000422074 SELEP16581 610 aa3.11□□□□□ -1.91
LINC00397-201ENST00000422074 CETN2P41208 172 aa3.11□□□□□ -1.91
LINC00397-201ENST00000422074 CLCN4P51793 760 aa3.11□□□□□ -1.91
LINC00397-201ENST00000422074 ZNF41P51814 821 aaPredicted RBP3.11□□□□□ -1.91
LINC00397-201ENST00000422074 ERVK-16P61578 105 aa3.11□□□□□ -1.91
LINC00397-201ENST00000422074 ACSM1Q08AH1 577 aa3.11□□□□□ -1.91
LINC00397-201ENST00000422074 ILF2Q12905 390 aaKnown RBP3.11□□□□□ -1.91
LINC00397-201ENST00000422074 PTGISQ16647 500 aa3.11□□□□□ -1.91
LINC00397-201ENST00000422074 SUSD4Q5VX71 490 aa3.11□□□□□ -1.91
LINC00397-201ENST00000422074 ERN2Q76MJ5 926 aaKnown RBP3.11□□□□□ -1.91
LINC00397-201ENST00000422074 TICAM2Q86XR7 235 aa3.11□□□□□ -1.91
LINC00397-201ENST00000422074 ZNF584Q8IVC4 421 aa3.11□□□□□ -1.91
LINC00397-201ENST00000422074 SLC22A15Q8IZD6 547 aa3.11□□□□□ -1.91
LINC00397-201ENST00000422074 IQUBQ8NA54 791 aa3.11□□□□□ -1.91
LINC00397-201ENST00000422074 CSNK1G2-AS1Q8NCQ2 148 aa3.11□□□□□ -1.91
LINC00397-201ENST00000422074 SETD6Q8TBK2 473 aa3.11□□□□□ -1.91
LINC00397-201ENST00000422074 TSACCQ96A04 125 aaPredicted RBP3.11□□□□□ -1.91
LINC00397-201ENST00000422074 C11orf52Q96A22 123 aa3.11□□□□□ -1.91
LINC00397-201ENST00000422074 NDNQ99608 321 aa3.11□□□□□ -1.91
LINC00397-201ENST00000422074 FERMT1Q9BQL6 677 aa3.11□□□□□ -1.91
LINC00397-201ENST00000422074 SLC25A23Q9BV35 468 aa3.11□□□□□ -1.91
LINC00397-201ENST00000422074 NKX6-3A6NJ46 265 aa3.1□□□□□ -1.91
LINC00397-201ENST00000422074 SHISA9B4DS77 424 aa3.1□□□□□ -1.91
LINC00397-201ENST00000422074 PHOX2AO14813 284 aa3.1□□□□□ -1.91
LINC00397-201ENST00000422074 WDR46O15213 610 aaKnown RBP3.1□□□□□ -1.91
LINC00397-201ENST00000422074 GALR3O60755 368 aaPredicted RBP3.1□□□□□ -1.91
LINC00397-201ENST00000422074 HSPA4LO95757 839 aa3.1□□□□□ -1.91
LINC00397-201ENST00000422074 HSP90AB1P08238 724 aaKnown RBP3.1□□□□□ -1.91
LINC00397-201ENST00000422074 PCP11498 1178 aaKnown RBP3.1□□□□□ -1.91
LINC00397-201ENST00000422074 MYL6BP14649 208 aa3.1□□□□□ -1.91
LINC00397-201ENST00000422074 GP9P14770 177 aa3.1□□□□□ -1.91
LINC00397-201ENST00000422074 AZGP1P25311 298 aaKnown RBP3.1□□□□□ -1.91
LINC00397-201ENST00000422074 OXTRP30559 389 aa3.1□□□□□ -1.91
LINC00397-201ENST00000422074 NDST2P52849 883 aa3.1□□□□□ -1.91
LINC00397-201ENST00000422074 UBASH3AP57075 661 aa3.1□□□□□ -1.91
LINC00397-201ENST00000422074 FKBP3Q00688 224 aaKnown RBP3.1□□□□□ -1.91
LINC00397-201ENST00000422074 CACNG1Q06432 222 aa3.1□□□□□ -1.91
LINC00397-201ENST00000422074 NONOQ15233 471 aaKnown RBP eCLIP3.1□□□□□ -1.91
LINC00397-201ENST00000422074 DUSP5Q16690 384 aa3.1□□□□□ -1.91
LINC00397-201ENST00000422074 ATP1A1-AS1Q5TC04 95 aa3.1□□□□□ -1.91
LINC00397-201ENST00000422074 SHQ1Q6PI26 577 aaKnown RBP3.1□□□□□ -1.91
LINC00397-201ENST00000422074 C11orf57Q6ZUT1 292 aaPredicted RBP3.1□□□□□ -1.91
LINC00397-201ENST00000422074 FAM47EQ6ZV65 393 aa3.1□□□□□ -1.91
LINC00397-201ENST00000422074 SPATA21Q7Z572 469 aa3.1□□□□□ -1.91
LINC00397-201ENST00000422074 CEACAM19Q7Z692 300 aa3.1□□□□□ -1.91
LINC00397-201ENST00000422074 TLK2Q86UE8 772 aa3.1□□□□□ -1.91
LINC00397-201ENST00000422074 SLC25A42Q86VD7 318 aa3.1□□□□□ -1.91
LINC00397-201ENST00000422074 GBP7Q8N8V2 638 aaPredicted RBP3.1□□□□□ -1.91
LINC00397-201ENST00000422074 LRTM2Q8N967 370 aa3.1□□□□□ -1.91
LINC00397-201ENST00000422074 ZNF597Q96LX8 424 aa3.1□□□□□ -1.91
LINC00397-201ENST00000422074 GTPBP2Q9BX10 602 aaKnown RBP3.1□□□□□ -1.91
LINC00397-201ENST00000422074 HACD3Q9P035 362 aa3.1□□□□□ -1.91
LINC00397-201ENST00000422074 PILRBQ9UKJ0 227 aa3.1□□□□□ -1.91
LINC00397-201ENST00000422074 NPHP3Q7Z494 1330 aa3.1□□□□□ -1.91
LINC00397-201ENST00000422074 A0A087WZ39 114 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 IQCMA0A1B0GVH7 501 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 F8VVB4 439 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 F8VWA3 439 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 SAP30O75446 220 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 RECQL5O94762 991 aaPredicted RBP3.09□□□□□ -1.91
LINC00397-201ENST00000422074 SERPING1P05155 500 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 SCG2P13521 617 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 F3P13726 295 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 AOC1P19801 751 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 PTAFRP25105 342 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 HSD17B3P37058 310 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 TFCP2Q12800 502 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 UPP1Q16831 310 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 HYAL4Q2M3T9 481 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 FAM106AQ4KMX7 169 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 ARMC3Q5W041 872 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 OR4C11Q6IEV9 310 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 CYB5D1Q6P9G0 228 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 PET117Q6UWS5 81 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 PPP1R21Q6ZMI0 780 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 METTL23Q86XA0 190 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 RNF130Q86XS8 419 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 C11orf53Q8IXP5 236 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 CCAR2Q8N163 923 aaKnown RBP3.09□□□□□ -1.91
LINC00397-201ENST00000422074 Q8NFD4 153 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 SSC4DQ8WTU2 575 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 SEPT1Q8WYJ6 367 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 EXT2Q93063 718 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 SPSB1Q96BD6 273 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 PGM2Q96G03 612 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 LURAP1Q96LR2 239 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 FER1L6-AS2Q96M78 137 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 FAM129AQ9BZQ8 928 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 XAB2Q9HCS7 855 aaKnown RBP3.09□□□□□ -1.91
LINC00397-201ENST00000422074 NLGN3Q9NZ94 848 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 BAIAP2L1Q9UHR4 511 aa3.09□□□□□ -1.91
LINC00397-201ENST00000422074 ZNF840PA6NDX5 716 aa3.08□□□□□ -1.92
LINC00397-201ENST00000422074 C17orf105B2RV13 164 aa3.08□□□□□ -1.92
LINC00397-201ENST00000422074 MTRF1O75570 445 aaKnown RBP3.08□□□□□ -1.92
LINC00397-201ENST00000422074 YES1P07947 543 aa3.08□□□□□ -1.92
LINC00397-201ENST00000422074 DUX4L4P0CJ87 422 aa3.08□□□□□ -1.92
LINC00397-201ENST00000422074 PDGFRAP16234 1089 aa3.08□□□□□ -1.92
LINC00397-201ENST00000422074 DUTP33316 252 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms